RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 LSM14AQ8ND56 463 aaKnown RBP4.09□□□□□ -1.75
SMC4-219ENST00000487747 ZNF583Q96ND8 569 aa4.09□□□□□ -1.75
SMC4-219ENST00000487747 ZNF570Q96NI8 536 aa4.09□□□□□ -1.75
SMC4-219ENST00000487747 CD180Q99467 661 aa4.09□□□□□ -1.75
SMC4-219ENST00000487747 RBM4Q9BWF3 364 aaKnown RBP4.09□□□□□ -1.75
SMC4-219ENST00000487747 HEMGNQ9BXL5 484 aa4.09□□□□□ -1.75
SMC4-219ENST00000487747 TAOK3Q9H2K8 898 aa4.09□□□□□ -1.75
SMC4-219ENST00000487747 TTYH1Q9H313 450 aaPredicted RBP4.09□□□□□ -1.75
SMC4-219ENST00000487747 MCM9Q9NXL9 1143 aa4.09□□□□□ -1.75
SMC4-219ENST00000487747 ALKBH4Q9NXW9 302 aa4.09□□□□□ -1.75
SMC4-219ENST00000487747 SUFUQ9UMX1 484 aa4.09□□□□□ -1.75
SMC4-219ENST00000487747 SMCHD1A6NHR9 2005 aa4.08□□□□□ -1.76
SMC4-219ENST00000487747 NR1D1P20393 614 aa4.08□□□□□ -1.76
SMC4-219ENST00000487747 ALDH4A1P30038 563 aa4.08□□□□□ -1.76
SMC4-219ENST00000487747 CORO1AP31146 461 aaKnown RBP4.08□□□□□ -1.76
SMC4-219ENST00000487747 ISL1P61371 349 aa4.08□□□□□ -1.76
SMC4-219ENST00000487747 UBE4AQ14139 1066 aa4.08□□□□□ -1.76
SMC4-219ENST00000487747 ARHGAP11AQ6P4F7 1023 aa4.08□□□□□ -1.76
SMC4-219ENST00000487747 ZNF852Q6ZMS4 543 aa4.08□□□□□ -1.76
SMC4-219ENST00000487747 TAOK1Q7L7X3 1001 aa4.08□□□□□ -1.76
SMC4-219ENST00000487747 KMT5CQ86Y97 462 aa4.08□□□□□ -1.76
SMC4-219ENST00000487747 C2CD5Q86YS7 1000 aa4.08□□□□□ -1.76
SMC4-219ENST00000487747 DHX40Q8IX18 779 aaKnown RBP4.08□□□□□ -1.76
SMC4-219ENST00000487747 DSELQ8IZU8 1212 aa4.08□□□□□ -1.76
SMC4-219ENST00000487747 DBF4BQ8NFT6 615 aa4.08□□□□□ -1.76
SMC4-219ENST00000487747 FAM76AQ8TAV0 307 aa4.08□□□□□ -1.76
SMC4-219ENST00000487747 GRAPLQ8TC17 118 aaPredicted RBP4.08□□□□□ -1.76
SMC4-219ENST00000487747 ZNF524Q96C55 264 aa4.08□□□□□ -1.76
SMC4-219ENST00000487747 CDCA5Q96FF9 252 aa4.08□□□□□ -1.76
SMC4-219ENST00000487747 F2RL3Q96RI0 385 aa4.08□□□□□ -1.76
SMC4-219ENST00000487747 SIN3AQ96ST3 1273 aa4.08□□□□□ -1.76
SMC4-219ENST00000487747 NOD2Q9HC29 1040 aa4.08□□□□□ -1.76
SMC4-219ENST00000487747 LSM4Q9Y4Z0 139 aaKnown RBP4.08□□□□□ -1.76
SMC4-219ENST00000487747 PMS2P5A8MQ11 134 aa4.07□□□□□ -1.76
SMC4-219ENST00000487747 MMP2P08253 660 aa4.07□□□□□ -1.76
SMC4-219ENST00000487747 CD58P19256 250 aa4.07□□□□□ -1.76
SMC4-219ENST00000487747 CLCNKAP51800 687 aa4.07□□□□□ -1.76
SMC4-219ENST00000487747 PITX1P78337 314 aaPredicted RBP4.07□□□□□ -1.76
SMC4-219ENST00000487747 TDGQ13569 410 aa4.07□□□□□ -1.76
SMC4-219ENST00000487747 ADCK5Q3MIX3 580 aa4.07□□□□□ -1.76
SMC4-219ENST00000487747 GPATCH4Q5T3I0 446 aaKnown RBP4.07□□□□□ -1.76
SMC4-219ENST00000487747 KCTD8Q6ZWB6 473 aa4.07□□□□□ -1.76
SMC4-219ENST00000487747 ADGRG6Q86SQ4 1221 aa4.07□□□□□ -1.76
SMC4-219ENST00000487747 FBXL8Q96CD0 374 aa4.07□□□□□ -1.76
SMC4-219ENST00000487747 ELP4Q96EB1 424 aa4.07□□□□□ -1.76
SMC4-219ENST00000487747 CMKLR1Q99788 373 aa4.07□□□□□ -1.76
SMC4-219ENST00000487747 MAGEE1Q9HCI5 957 aa4.07□□□□□ -1.76
SMC4-219ENST00000487747 ITM2CQ9NQX7 267 aa4.07□□□□□ -1.76
SMC4-219ENST00000487747 IL1RAPL1Q9NZN1 696 aa4.07□□□□□ -1.76
SMC4-219ENST00000487747 KIAA1456Q9P272 454 aa4.07□□□□□ -1.76
SMC4-219ENST00000487747 FAF1Q9UNN5 650 aaPredicted RBP4.07□□□□□ -1.76
SMC4-219ENST00000487747 OR2W1Q9Y3N9 320 aa4.07□□□□□ -1.76
SMC4-219ENST00000487747 PRSS1P07477 247 aa4.06□□□□□ -1.76
SMC4-219ENST00000487747 SHMT1P34896 483 aa4.06□□□□□ -1.76
SMC4-219ENST00000487747 HNRNPH2P55795 449 aaKnown RBP4.06□□□□□ -1.76
SMC4-219ENST00000487747 TBL3Q12788 808 aaKnown RBP4.06□□□□□ -1.76
SMC4-219ENST00000487747 MORC3Q14149 939 aa4.06□□□□□ -1.76
SMC4-219ENST00000487747 ANKRD1Q15327 319 aa4.06□□□□□ -1.76
SMC4-219ENST00000487747 CCDC96Q2M329 555 aa4.06□□□□□ -1.76
SMC4-219ENST00000487747 METTL27Q8N6F8 245 aaPredicted RBP4.06□□□□□ -1.76
SMC4-219ENST00000487747 KLHDC9Q8NEP7 349 aa4.06□□□□□ -1.76
SMC4-219ENST00000487747 BBS4Q96RK4 519 aa4.06□□□□□ -1.76
SMC4-219ENST00000487747 MPHOSPH6Q99547 160 aaKnown RBP4.06□□□□□ -1.76
SMC4-219ENST00000487747 LBHD1Q9BQE6 289 aaPredicted RBP4.06□□□□□ -1.76
SMC4-219ENST00000487747 REEP2Q9BRK0 252 aa4.06□□□□□ -1.76
SMC4-219ENST00000487747 PCGF6Q9BYE7 350 aa4.06□□□□□ -1.76
SMC4-219ENST00000487747 MMP25Q9NPA2 562 aa4.06□□□□□ -1.76
SMC4-219ENST00000487747 HCFC1R1Q9NWW0 138 aa4.06□□□□□ -1.76
SMC4-219ENST00000487747 KIAA1210Q9ULL0 1709 aa4.06□□□□□ -1.76
SMC4-219ENST00000487747 IGKV3D-15A0A087WSY6 115 aa4.05□□□□□ -1.76
SMC4-219ENST00000487747 TMEM202A6NGA9 273 aa4.05□□□□□ -1.76
SMC4-219ENST00000487747 AKR1B15C9JRZ8 316 aaPredicted RBP4.05□□□□□ -1.76
SMC4-219ENST00000487747 URODP06132 367 aa4.05□□□□□ -1.76
SMC4-219ENST00000487747 HEXAP06865 529 aa4.05□□□□□ -1.76
SMC4-219ENST00000487747 USP8P40818 1118 aa4.05□□□□□ -1.76
SMC4-219ENST00000487747 VEPH1Q14D04 833 aa4.05□□□□□ -1.76
SMC4-219ENST00000487747 BRD3Q15059 726 aa4.05□□□□□ -1.76
SMC4-219ENST00000487747 TAF11Q15544 211 aa4.05□□□□□ -1.76
SMC4-219ENST00000487747 SLC45A4Q5BKX6 768 aa4.05□□□□□ -1.76
SMC4-219ENST00000487747 ANKRD45Q5TZF3 282 aa4.05□□□□□ -1.76
SMC4-219ENST00000487747 ANO1Q5XXA6 986 aa4.05□□□□□ -1.76
SMC4-219ENST00000487747 ZNF772Q68DY9 489 aaPredicted RBP4.05□□□□□ -1.76
SMC4-219ENST00000487747 LCTLQ6UWM7 567 aa4.05□□□□□ -1.76
SMC4-219ENST00000487747 ZNF497Q6ZNH5 498 aa4.05□□□□□ -1.76
SMC4-219ENST00000487747 ASB18Q6ZVZ8 466 aa4.05□□□□□ -1.76
SMC4-219ENST00000487747 TADA2BQ86TJ2 420 aa4.05□□□□□ -1.76
SMC4-219ENST00000487747 TDRPQ86YL5 185 aa4.05□□□□□ -1.76
SMC4-219ENST00000487747 RNF113BQ8IZP6 322 aaKnown RBP4.05□□□□□ -1.76
SMC4-219ENST00000487747 ZCCHC9Q8N567 271 aaKnown RBP4.05□□□□□ -1.76
SMC4-219ENST00000487747 ZBTB2Q8N680 514 aa4.05□□□□□ -1.76
SMC4-219ENST00000487747 BEST2Q8NFU1 509 aa4.05□□□□□ -1.76
SMC4-219ENST00000487747 PPM1EQ8WY54 764 aa4.05□□□□□ -1.76
SMC4-219ENST00000487747 TBC1D20Q96BZ9 403 aa4.05□□□□□ -1.76
SMC4-219ENST00000487747 TKTL2Q9H0I9 626 aa4.05□□□□□ -1.76
SMC4-219ENST00000487747 FBXO9Q9UK97 447 aaPredicted RBP4.05□□□□□ -1.76
SMC4-219ENST00000487747 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.05□□□□□ -1.762e-144■■■■■ 553.7
SMC4-219ENST00000487747 AMDHD2Q9Y303 409 aa4.05□□□□□ -1.76
SMC4-219ENST00000487747 DVL1O14640 695 aa4.04□□□□□ -1.76
SMC4-219ENST00000487747 ZNF500O60304 480 aaPredicted RBP4.04□□□□□ -1.76
SMC4-219ENST00000487747 PATE4P0C8F1 98 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms