RNA–Protein interactions for RNA: ENST00000487519.5

TFAM-204, Transcript of transcription factor A, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAM, Length 5,414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-204ENST00000487519 TSPAN1O60635 241 aa13.98□□□□□ -0.17
TFAM-204ENST00000487519 STX11O75558 287 aa13.98□□□□□ -0.17
TFAM-204ENST00000487519 KRT33AO76009 404 aa13.98□□□□□ -0.17
TFAM-204ENST00000487519 TSHRP16473 764 aa13.98□□□□□ -0.17
TFAM-204ENST00000487519 ITGA1P56199 1179 aa13.98□□□□□ -0.17
TFAM-204ENST00000487519 SULT2A1Q06520 285 aa13.98□□□□□ -0.17
TFAM-204ENST00000487519 DLG2Q15700 870 aa13.98□□□□□ -0.17
TFAM-204ENST00000487519 KBTBD2Q8IY47 623 aa13.98□□□□□ -0.17
TFAM-204ENST00000487519 ING5Q8WYH8 240 aa13.98□□□□□ -0.17
TFAM-204ENST00000487519 TRAPPC9Q96Q05 1148 aa13.98□□□□□ -0.17
TFAM-204ENST00000487519 VPS4AQ9UN37 437 aa13.98□□□□□ -0.17
TFAM-204ENST00000487519 R3HDM2Q9Y2K5 976 aaKnown RBP13.98□□□□□ -0.17
TFAM-204ENST00000487519 OR10H3O60404 316 aa13.98□□□□□ -0.17
TFAM-204ENST00000487519 RNASEH2AO75792 299 aaKnown RBP13.98□□□□□ -0.17
TFAM-204ENST00000487519 SSR2P43308 183 aa13.98□□□□□ -0.17
TFAM-204ENST00000487519 SH3BP5LQ7L8J4 393 aa13.98□□□□□ -0.17
TFAM-204ENST00000487519 ALYREFQ86V81 257 aaKnown RBP13.98□□□□□ -0.17
TFAM-204ENST00000487519 ENKURQ8TC29 256 aa13.98□□□□□ -0.17
TFAM-204ENST00000487519 UPF1Q92900 1129 aaKnown RBP eCLIP13.98□□□□□ -0.171e-8■■■■□ 23.7
TFAM-204ENST00000487519 SPATA5L1Q9BVQ7 753 aa13.98□□□□□ -0.17
TFAM-204ENST00000487519 RPRD1BQ9NQG5 326 aaKnown RBP13.98□□□□□ -0.17
TFAM-204ENST00000487519 SORCS3Q9UPU3 1222 aa13.98□□□□□ -0.17
TFAM-204ENST00000487519 PTPRJQ12913 1337 aa13.98□□□□□ -0.17
TFAM-204ENST00000487519 KIF20BQ96Q89 1820 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 PSMD8P48556 350 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 DRG2P55039 364 aaKnown RBP13.97□□□□□ -0.17
TFAM-204ENST00000487519 C21orf59P57076 290 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 PPIDQ08752 370 aaKnown RBP13.97□□□□□ -0.17
TFAM-204ENST00000487519 NOMO1Q15155 1222 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 MPPE1Q53F39 396 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 DQX1Q8TE96 717 aaKnown RBP13.97□□□□□ -0.17
TFAM-204ENST00000487519 TSSK3Q96PN8 268 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 MCMBPQ9BTE3 642 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 NUAK2Q9H093 628 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 TNKS2Q9H2K2 1166 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 EGFL7Q9UHF1 273 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 RAI2Q9Y5P3 530 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 GMPPBQ9Y5P6 360 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 GOLGA4Q13439 2230 aaKnown RBP13.97□□□□□ -0.17
TFAM-204ENST00000487519 GLYATL1P3A0A0U1RQE8 302 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 EFCAB10A6NFE3 127 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 RNF225M0QZC1 329 aaPredicted RBP13.97□□□□□ -0.17
TFAM-204ENST00000487519 PRMT5O14744 637 aaPredicted RBP13.97□□□□□ -0.17
TFAM-204ENST00000487519 GCATO75600 419 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 SLC25A12O75746 678 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 PRG2P13727 222 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 RPL3P39023 403 aaKnown RBP13.97□□□□□ -0.17
TFAM-204ENST00000487519 GABRB2P47870 512 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 DEF8Q6ZN54 512 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 KIAA0408Q6ZU52 694 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 LDB1Q86U70 411 aaPredicted RBP13.97□□□□□ -0.17
TFAM-204ENST00000487519 UBASH3BQ8TF42 649 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 SLC39A8Q9C0K1 460 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 SLC17A7Q9P2U7 560 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 MCM8Q9UJA3 840 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 MRPS7Q9Y2R9 242 aaKnown RBP13.97□□□□□ -0.17
TFAM-204ENST00000487519 E9PAM4 449 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 DUSP11O75319 330 aaKnown RBP13.97□□□□□ -0.17
TFAM-204ENST00000487519 FGBP02675 491 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 APODP05090 189 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 CLK3P49761 638 aaKnown RBP13.97□□□□□ -0.17
TFAM-204ENST00000487519 AIF1P55008 147 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 INTS6LQ5JSJ4 861 aaKnown RBP13.97□□□□□ -0.17
TFAM-204ENST00000487519 PMF1Q6P1K2 205 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 NLGN2Q8NFZ4 835 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 CLP1Q92989 425 aaKnown RBP13.97□□□□□ -0.17
TFAM-204ENST00000487519 PTCD3Q96EY7 689 aaKnown RBP13.97□□□□□ -0.17
TFAM-204ENST00000487519 KCTD15Q96SI1 283 aaPredicted RBP13.97□□□□□ -0.17
TFAM-204ENST00000487519 TBC1D10AQ9BXI6 508 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 RHOJQ9H4E5 214 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 ERVK-5Q9HDB9 667 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 COL20A1Q9P218 1284 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 C15orf41Q9Y2V0 281 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 CCL22O00626 93 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 RPL17P18621 184 aaKnown RBP13.97□□□□□ -0.17
TFAM-204ENST00000487519 AMIGO2Q86SJ2 522 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 C17orf64Q86WR6 236 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 SYT17Q9BSW7 474 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 BCL2L14Q9BZR8 327 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 UNC5CO95185 931 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 TACR2P21452 398 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 HNRNPH3P31942 346 aaKnown RBP13.97□□□□□ -0.17
TFAM-204ENST00000487519 SRSF11Q05519 484 aaKnown RBP13.97□□□□□ -0.17
TFAM-204ENST00000487519 SF1Q15637 639 aaKnown RBP13.97□□□□□ -0.17
TFAM-204ENST00000487519 DGUOKQ16854 277 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 PHYKPLQ8IUZ5 450 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 ST13P5Q8NFI4 369 aaPredicted RBP13.97□□□□□ -0.17
TFAM-204ENST00000487519 ASZ1Q8WWH4 475 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 PPCDCQ96CD2 204 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 MCRS1Q96EZ8 462 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 CAPNS2Q96L46 248 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 TSPAN18Q96SJ8 248 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 POLR1BQ9H9Y6 1135 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 IKZF3Q9UKT9 509 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 ZNF780BQ9Y6R6 833 aa13.97□□□□□ -0.17
TFAM-204ENST00000487519 AP3D1O14617 1153 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 ENTPD5O75356 428 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 C4BPAP04003 597 aaKnown RBP13.96□□□□□ -0.17
TFAM-204ENST00000487519 IL6P05231 212 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 C2P06681 752 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms