RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 RAD18Q9NS91 495 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 APPL1Q9UKG1 709 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 GPR34Q9UPC5 381 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.46□□□□□ -0.57
CCM2-213ENST00000480658 PCDHGC4Q9Y5F7 938 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 RAI2Q9Y5P3 530 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 PLXNB3Q9ULL4 1909 aa11.46□□□□□ -0.58
CCM2-213ENST00000480658 LY6G6EA0A0G2JKS1 128 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 A0A0J9YYE9 177 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 CAPN8A6NHC0 703 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 EIF4E1BA6NMX2 242 aaKnown RBP11.45□□□□□ -0.58
CCM2-213ENST00000480658 AKR1B15C9JRZ8 316 aaPredicted RBP11.45□□□□□ -0.58
CCM2-213ENST00000480658 MTSS1O43312 755 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 GCATO75600 419 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 IPO7O95373 1038 aaKnown RBP11.45□□□□□ -0.58
CCM2-213ENST00000480658 TRBC1P01850 177 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 IL4RP24394 825 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 NR2C2P49116 596 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 ARSEP51690 589 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 GABREP78334 506 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 PPIDQ08752 370 aaKnown RBP11.45□□□□□ -0.58
CCM2-213ENST00000480658 BIRC2Q13490 618 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 PDK1Q15118 436 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 TCEAL1Q15170 157 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 SLC14A2Q15849 920 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 CNGA3Q16281 694 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 ASTE1Q2TB18 679 aaPredicted RBP11.45□□□□□ -0.58
CCM2-213ENST00000480658 TPRG1LQ5T0D9 272 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 RAET1GQ6H3X3 334 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 RD3Q7Z3Z2 195 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 TAF8Q7Z7C8 310 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 PDZD3Q86UT5 571 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 RHOT1Q8IXI2 618 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 CCDC13Q8IYE1 715 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 NETO2Q8NC67 525 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 LSM14AQ8ND56 463 aaKnown RBP11.45□□□□□ -0.58
CCM2-213ENST00000480658 CCNYQ8ND76 341 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 CCHCR1Q8TD31 782 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 FUBP1Q96AE4 644 aaKnown RBP11.45□□□□□ -0.58
CCM2-213ENST00000480658 PDXPQ96GD0 296 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 LIN37Q96GY3 246 aaPredicted RBP11.45□□□□□ -0.58
CCM2-213ENST00000480658 BTBD6Q96KE9 485 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 DCBLD2Q96PD2 775 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 GFM1Q96RP9 751 aaKnown RBP11.45□□□□□ -0.58
CCM2-213ENST00000480658 LYSMD1Q96S90 227 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 LGMNQ99538 433 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 DPYSL5Q9BPU6 564 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 FERMT1Q9BQL6 677 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 TDRD1Q9BXT4 1180 aaKnown RBP11.45□□□□□ -0.58
CCM2-213ENST00000480658 TEX101Q9BY14 249 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 ETNK2Q9NVF9 386 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 RBM22Q9NW64 420 aaKnown RBP eCLIP11.45□□□□□ -0.58
CCM2-213ENST00000480658 AKAP7Q9P0M2 348 aaPredicted RBP11.45□□□□□ -0.58
CCM2-213ENST00000480658 TTLL3Q9Y4R7 772 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 U3KQA8 63 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 SPEGQ15772 3267 aa11.45□□□□□ -0.58
CCM2-213ENST00000480658 CCDC187A0A096LP49 1063 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 LRRD1A4D1F6 860 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 GPR89AB7ZAQ6 455 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 APOL1O14791 398 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 PSTPIP1O43586 416 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 FZD6O60353 706 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 ITGA2BP08514 1039 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 GPR89BP0CG08 455 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 SLC2A4P14672 509 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 TCF4P15884 667 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 ITIH2P19823 946 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 GJC1P36383 396 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 GPR1P46091 355 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 IFI35P80217 286 aaPredicted RBP11.44□□□□□ -0.58
CCM2-213ENST00000480658 CDK3Q00526 305 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 TRAF2Q12933 501 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 C1orf61Q13536 156 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 TFDP2Q14188 446 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 COL28A1Q2UY09 1125 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 C14orf28Q4W4Y0 310 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 CERCAMQ5T4B2 595 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 TXNRD3NBQ6F5E7 133 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 CCDC70Q6NSX1 233 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 SARM1Q6SZW1 724 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 ADAMTSL4Q6UY14 1074 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 HEATR4Q86WZ0 1026 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 CCDC170Q8IYT3 715 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 TXLNBQ8N3L3 684 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 KYQ8NBH2 561 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 GPR156Q8NFN8 814 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 EXD1Q8NHP7 514 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 SLC35G2Q8TBE7 412 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 TSACCQ96A04 125 aaPredicted RBP11.44□□□□□ -0.58
CCM2-213ENST00000480658 AP2M1Q96CW1 435 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 RNF157Q96PX1 679 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 CLPBQ9H078 707 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 STN1Q9H668 368 aaKnown RBP11.44□□□□□ -0.58
CCM2-213ENST00000480658 RMI1Q9H9A7 625 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 PKD2L2Q9NZM6 624 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 VPS18Q9P253 973 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 GULP1Q9UBP9 304 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 ANKRD11Q6UB99 2663 aaPredicted RBP11.44□□□□□ -0.58
CCM2-213ENST00000480658 PKD1L2Q7Z442 2459 aa11.44□□□□□ -0.58
CCM2-213ENST00000480658 FAM208BQ5VWN6 2430 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms