RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 SMARCAL1Q9NZC9 954 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 AMACRQ9UHK6 382 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 DNPEPQ9ULA0 475 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 EFR3BQ9Y2G0 817 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 HS3ST3A1Q9Y663 406 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 CACNA1AO00555 2505 aa12.45□□□□□ -0.42
APTX-220ENST00000476858 CAPN8A6NHC0 703 aa12.45□□□□□ -0.42
APTX-220ENST00000476858 FPGTO14772 594 aa12.45□□□□□ -0.42
APTX-220ENST00000476858 KCNN4O15554 427 aa12.45□□□□□ -0.42
APTX-220ENST00000476858 SOD1P00441 154 aa12.45□□□□□ -0.42
APTX-220ENST00000476858 FUCA1P04066 466 aa12.45□□□□□ -0.42
APTX-220ENST00000476858 ATXN1LP0C7T5 689 aaKnown RBP12.45□□□□□ -0.42
APTX-220ENST00000476858 PSMB4P28070 264 aa12.45□□□□□ -0.42
APTX-220ENST00000476858 EPHA8P29322 1005 aaPredicted RBP12.45□□□□□ -0.42
APTX-220ENST00000476858 NUDT1P36639 197 aa12.45□□□□□ -0.42
APTX-220ENST00000476858 SUOXP51687 545 aa12.45□□□□□ -0.42
APTX-220ENST00000476858 SPARCL1Q14515 664 aa12.45□□□□□ -0.42
APTX-220ENST00000476858 LRRC14Q15048 493 aa12.45□□□□□ -0.42
APTX-220ENST00000476858 N4BP2L1Q5TBK1 243 aaPredicted RBP12.45□□□□□ -0.42
APTX-220ENST00000476858 DARS2Q6PI48 645 aaKnown RBP12.45□□□□□ -0.42
APTX-220ENST00000476858 PID1Q7Z2X4 250 aa12.45□□□□□ -0.42
APTX-220ENST00000476858 LYSMD3Q7Z3D4 306 aa12.45□□□□□ -0.42
APTX-220ENST00000476858 TECPR1Q7Z6L1 1165 aa12.45□□□□□ -0.42
APTX-220ENST00000476858 IQCHQ86VS3 1027 aa12.45□□□□□ -0.42
APTX-220ENST00000476858 C17orf53Q8N3J3 647 aaPredicted RBP12.45□□□□□ -0.42
APTX-220ENST00000476858 GLIS1Q8NBF1 620 aa12.45□□□□□ -0.42
APTX-220ENST00000476858 SLC35B2Q8TB61 432 aa12.45□□□□□ -0.42
APTX-220ENST00000476858 BAHD1Q8TBE0 780 aaPredicted RBP12.45□□□□□ -0.42
APTX-220ENST00000476858 MRGPRX2Q96LB1 330 aa12.45□□□□□ -0.42
APTX-220ENST00000476858 APOL2Q9BQE5 337 aa12.45□□□□□ -0.42
APTX-220ENST00000476858 KLHL8Q9P2G9 620 aaPredicted RBP12.45□□□□□ -0.42
APTX-220ENST00000476858 PCOLCE2Q9UKZ9 415 aa12.45□□□□□ -0.42
APTX-220ENST00000476858 SHOC2Q9UQ13 582 aa12.45□□□□□ -0.42
APTX-220ENST00000476858 SPTY2D1-AS1A0A0U1RR47 76 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 TMEM202A6NGA9 273 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 HACD1B0YJ81 288 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 TRIM38O00635 465 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 CASC3O15234 703 aaKnown RBP12.44□□□□□ -0.42
APTX-220ENST00000476858 TJP3O95049 919 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 METTL18O95568 372 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 AGTP01019 485 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 ETS1P14921 441 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 CA5AP35218 305 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 CCT8P50990 548 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 STC1P52823 247 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 WNT3AP56704 352 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 CLDN6P56747 220 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 POLR2LP62875 67 aaKnown RBP12.44□□□□□ -0.42
APTX-220ENST00000476858 XRCC4Q13426 336 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 C1orf61Q13536 156 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 SNX1Q13596 522 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 PTPRCAPQ14761 206 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 AGERQ15109 404 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 RPS6KA1Q15418 735 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 ANKRD20A2Q5SQ80 823 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 FAXCQ5TGI0 409 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 ANKRD20A1Q5TYW2 823 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 ANKRD20A3Q5VUR7 823 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 IL27RAQ6UWB1 636 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 SLCO6A1Q86UG4 719 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 TRIM74Q86UV6 250 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 SLC13A5Q86YT5 568 aaPredicted RBP12.44□□□□□ -0.42
APTX-220ENST00000476858 SFTPA2Q8IWL1 248 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 SLC35F6Q8N357 371 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 TXLNBQ8N3L3 684 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 SLC25A41Q8N5S1 370 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 FAM71DQ8N9W8 422 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 DENND6BQ8NEG7 585 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 SETD7Q8WTS6 366 aaKnown RBP12.44□□□□□ -0.42
APTX-220ENST00000476858 TSACCQ96A04 125 aaPredicted RBP12.44□□□□□ -0.42
APTX-220ENST00000476858 NUS1Q96E22 293 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 DTD2Q96FN9 168 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 TMEM121Q9BTD3 319 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 APOOQ9BUR5 198 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 ABCG8Q9H221 673 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 MRPL40Q9NQ50 206 aaKnown RBP12.44□□□□□ -0.42
APTX-220ENST00000476858 DNAJC28Q9NX36 388 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 TOR4AQ9NXH8 423 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 TPX2Q9ULW0 747 aaKnown RBP12.44□□□□□ -0.42
APTX-220ENST00000476858 PCYT1BQ9Y5K3 369 aaPredicted RBP12.44□□□□□ -0.42
APTX-220ENST00000476858 LRP4O75096 1905 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 SPTBN2O15020 2390 aa12.44□□□□□ -0.42
APTX-220ENST00000476858 ANKRD66B4E2M5 251 aa12.43□□□□□ -0.42
APTX-220ENST00000476858 FANCGO15287 622 aa12.43□□□□□ -0.42
APTX-220ENST00000476858 BUD23O43709 281 aaKnown RBP12.43□□□□□ -0.42
APTX-220ENST00000476858 USP12O75317 370 aa12.43□□□□□ -0.42
APTX-220ENST00000476858 GCATO75600 419 aa12.43□□□□□ -0.42
APTX-220ENST00000476858 SLC4A1P02730 911 aa12.43□□□□□ -0.42
APTX-220ENST00000476858 ATP1A1P05023 1023 aaKnown RBP12.43□□□□□ -0.42
APTX-220ENST00000476858 PTMAP06454 111 aaKnown RBP12.43□□□□□ -0.42
APTX-220ENST00000476858 ZNF883P0CG24 379 aa12.43□□□□□ -0.42
APTX-220ENST00000476858 SPINK2P20155 84 aa12.43□□□□□ -0.42
APTX-220ENST00000476858 CSRP1P21291 193 aaKnown RBP12.43□□□□□ -0.42
APTX-220ENST00000476858 DGKAP23743 735 aa12.43□□□□□ -0.42
APTX-220ENST00000476858 RXRGP48443 463 aa12.43□□□□□ -0.42
APTX-220ENST00000476858 POLD2P49005 469 aa12.43□□□□□ -0.42
APTX-220ENST00000476858 EPHB1P54762 984 aa12.43□□□□□ -0.42
APTX-220ENST00000476858 CDK18Q07002 472 aa12.43□□□□□ -0.42
APTX-220ENST00000476858 DNAJC3Q13217 504 aa12.43□□□□□ -0.42
APTX-220ENST00000476858 ALG11Q2TAA5 492 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms