RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 G6PDP11413 515 aa4.91□□□□□ -1.62
SMC4-205ENST00000465563 ITGA2P17301 1181 aa4.91□□□□□ -1.62
SMC4-205ENST00000465563 EIF2S3P41091 472 aaKnown RBP4.91□□□□□ -1.62
SMC4-205ENST00000465563 RAD23BP54727 409 aa4.91□□□□□ -1.62
SMC4-205ENST00000465563 DVL1P1P54792 670 aaPredicted RBP4.91□□□□□ -1.62
SMC4-205ENST00000465563 VEPH1Q14D04 833 aa4.91□□□□□ -1.62
SMC4-205ENST00000465563 PDCD2Q16342 344 aaPredicted RBP4.91□□□□□ -1.62
SMC4-205ENST00000465563 PDSS1Q5T2R2 415 aa4.91□□□□□ -1.62
SMC4-205ENST00000465563 ANKRD54Q6NXT1 300 aa4.91□□□□□ -1.62
SMC4-205ENST00000465563 ARHGAP11AQ6P4F7 1023 aa4.91□□□□□ -1.62
SMC4-205ENST00000465563 GPAT4Q86UL3 456 aa4.91□□□□□ -1.62
SMC4-205ENST00000465563 BEST2Q8NFU1 509 aa4.91□□□□□ -1.62
SMC4-205ENST00000465563 COG8Q96MW5 612 aa4.91□□□□□ -1.62
SMC4-205ENST00000465563 MOV10L1Q9BXT6 1211 aaKnown RBP4.91□□□□□ -1.62
SMC4-205ENST00000465563 FKRPQ9H9S5 495 aa4.91□□□□□ -1.62
SMC4-205ENST00000465563 TAGLN3Q9UI15 199 aa4.91□□□□□ -1.62
SMC4-205ENST00000465563 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.91□□□□□ -1.62
SMC4-205ENST00000465563 RIPOR2Q9Y4F9 1068 aa4.91□□□□□ -1.62
SMC4-205ENST00000465563 STON1Q9Y6Q2 735 aa4.91□□□□□ -1.62
SMC4-205ENST00000465563 GREB1LQ9C091 1923 aaPredicted RBP4.9□□□□□ -1.62
SMC4-205ENST00000465563 PMS2P5A8MQ11 134 aa4.9□□□□□ -1.63
SMC4-205ENST00000465563 AGAP20933 346 aa4.9□□□□□ -1.63
SMC4-205ENST00000465563 RRM1P23921 792 aa4.9□□□□□ -1.63
SMC4-205ENST00000465563 MORC3Q14149 939 aa4.9□□□□□ -1.63
SMC4-205ENST00000465563 TAF11Q15544 211 aa4.9□□□□□ -1.63
SMC4-205ENST00000465563 ZNF852Q6ZMS4 543 aa4.9□□□□□ -1.63
SMC4-205ENST00000465563 ADGRG6Q86SQ4 1221 aa4.9□□□□□ -1.63
SMC4-205ENST00000465563 C2CD5Q86YS7 1000 aa4.9□□□□□ -1.63
SMC4-205ENST00000465563 KRTAP7-1Q8IUC3 87 aa4.9□□□□□ -1.63
SMC4-205ENST00000465563 HERC6Q8IVU3 1022 aa4.9□□□□□ -1.63
SMC4-205ENST00000465563 C1orf87Q8N0U7 546 aa4.9□□□□□ -1.63
SMC4-205ENST00000465563 SPEM1Q8N4L4 309 aa4.9□□□□□ -1.63
SMC4-205ENST00000465563 DUSP19Q8WTR2 217 aa4.9□□□□□ -1.63
SMC4-205ENST00000465563 EYA3Q99504 573 aa4.9□□□□□ -1.63
SMC4-205ENST00000465563 KIAA1456Q9P272 454 aa4.9□□□□□ -1.63
SMC4-205ENST00000465563 CTNNAL1Q9UBT7 734 aa4.9□□□□□ -1.63
SMC4-205ENST00000465563 A0A1B0GVY2 172 aa4.89□□□□□ -1.63
SMC4-205ENST00000465563 BCAT2O15382 392 aaPredicted RBP4.89□□□□□ -1.63
SMC4-205ENST00000465563 TSPAN3O60637 253 aa4.89□□□□□ -1.63
SMC4-205ENST00000465563 KRT5P13647 590 aa4.89□□□□□ -1.63
SMC4-205ENST00000465563 EDN2P20800 178 aa4.89□□□□□ -1.63
SMC4-205ENST00000465563 ALDH4A1P30038 563 aa4.89□□□□□ -1.63
SMC4-205ENST00000465563 PAPOLAP51003 745 aaKnown RBP4.89□□□□□ -1.63
SMC4-205ENST00000465563 TERF1P54274 439 aa4.89□□□□□ -1.63
SMC4-205ENST00000465563 SGO1Q5FBB7 561 aa4.89□□□□□ -1.63
SMC4-205ENST00000465563 GPATCH4Q5T3I0 446 aaKnown RBP4.89□□□□□ -1.63
SMC4-205ENST00000465563 KCTD8Q6ZWB6 473 aa4.89□□□□□ -1.63
SMC4-205ENST00000465563 LINGO2Q7L985 606 aa4.89□□□□□ -1.63
SMC4-205ENST00000465563 TADA2BQ86TJ2 420 aa4.89□□□□□ -1.63
SMC4-205ENST00000465563 ZNF34Q8IZ26 560 aa4.89□□□□□ -1.63
SMC4-205ENST00000465563 BBS4Q96RK4 519 aa4.89□□□□□ -1.63
SMC4-205ENST00000465563 LITAFQ99732 161 aa4.89□□□□□ -1.63
SMC4-205ENST00000465563 MAGEE1Q9HCI5 957 aa4.89□□□□□ -1.63
SMC4-205ENST00000465563 FAF1Q9UNN5 650 aaPredicted RBP4.89□□□□□ -1.63
SMC4-205ENST00000465563 COL2A1P02458 1487 aaPredicted RBP4.88□□□□□ -1.63
SMC4-205ENST00000465563 IGKV3D-20A0A0C4DH25 116 aa4.88□□□□□ -1.63
SMC4-205ENST00000465563 TUBBP07437 444 aa4.88□□□□□ -1.63
SMC4-205ENST00000465563 CYC1P08574 325 aa4.88□□□□□ -1.63
SMC4-205ENST00000465563 PAX1P15863 534 aa4.88□□□□□ -1.63
SMC4-205ENST00000465563 DDX5P17844 614 aaKnown RBP4.88□□□□□ -1.63
SMC4-205ENST00000465563 HOXA1P49639 335 aaPredicted RBP4.88□□□□□ -1.63
SMC4-205ENST00000465563 HNRNPH2P55795 449 aaKnown RBP4.88□□□□□ -1.63
SMC4-205ENST00000465563 TUBB4BP68371 445 aa4.88□□□□□ -1.63
SMC4-205ENST00000465563 PDE1BQ01064 536 aa4.88□□□□□ -1.63
SMC4-205ENST00000465563 GRIK3Q13003 919 aa4.88□□□□□ -1.63
SMC4-205ENST00000465563 PPIGQ13427 754 aaKnown RBP eCLIP4.88□□□□□ -1.63
SMC4-205ENST00000465563 UBE4AQ14139 1066 aa4.88□□□□□ -1.63
SMC4-205ENST00000465563 KRT72Q14CN4 511 aa4.88□□□□□ -1.63
SMC4-205ENST00000465563 TAF5Q15542 800 aa4.88□□□□□ -1.63
SMC4-205ENST00000465563 TCTN1Q2MV58 587 aa4.88□□□□□ -1.63
SMC4-205ENST00000465563 EIF2S3LQ2VIR3 472 aaKnown RBP4.88□□□□□ -1.63
SMC4-205ENST00000465563 ZNF667Q5HYK9 610 aa4.88□□□□□ -1.63
SMC4-205ENST00000465563 CCNYL2Q5T2Q4 361 aa4.88□□□□□ -1.63
SMC4-205ENST00000465563 ZCCHC9Q8N567 271 aaKnown RBP4.88□□□□□ -1.63
SMC4-205ENST00000465563 LSM14AQ8ND56 463 aaKnown RBP4.88□□□□□ -1.63
SMC4-205ENST00000465563 TMEM202A6NGA9 273 aa4.87□□□□□ -1.63
SMC4-205ENST00000465563 IRAK2O43187 625 aa4.87□□□□□ -1.63
SMC4-205ENST00000465563 MT-CYBP00156 380 aaPredicted RBP4.87□□□□□ -1.63
SMC4-205ENST00000465563 MYOD1P15172 320 aa4.87□□□□□ -1.63
SMC4-205ENST00000465563 MAOAP21397 527 aa4.87□□□□□ -1.63
SMC4-205ENST00000465563 POU1F1P28069 291 aa4.87□□□□□ -1.63
SMC4-205ENST00000465563 DDIT3P35638 169 aa4.87□□□□□ -1.63
SMC4-205ENST00000465563 ZNF876PQ49A33 203 aa4.87□□□□□ -1.63
SMC4-205ENST00000465563 SLC35E4Q6ICL7 350 aa4.87□□□□□ -1.63
SMC4-205ENST00000465563 KCTD18Q6PI47 426 aaPredicted RBP4.87□□□□□ -1.63
SMC4-205ENST00000465563 CPLX2Q6PUV4 134 aaKnown RBP4.87□□□□□ -1.63
SMC4-205ENST00000465563 LCTLQ6UWM7 567 aa4.87□□□□□ -1.63
SMC4-205ENST00000465563 TNIP2Q8NFZ5 429 aa4.87□□□□□ -1.63
SMC4-205ENST00000465563 OR10V1Q8NGI7 309 aa4.87□□□□□ -1.63
SMC4-205ENST00000465563 NOC3LQ8WTT2 800 aaKnown RBP4.87□□□□□ -1.63
SMC4-205ENST00000465563 RUFY2Q8WXA3 655 aa4.87□□□□□ -1.63
SMC4-205ENST00000465563 LGALS12Q96DT0 336 aa4.87□□□□□ -1.63
SMC4-205ENST00000465563 SH3GL2Q99962 352 aa4.87□□□□□ -1.63
SMC4-205ENST00000465563 KCNN2Q9H2S1 579 aa4.87□□□□□ -1.63
SMC4-205ENST00000465563 BPIFA1Q9NP55 256 aa4.87□□□□□ -1.63
SMC4-205ENST00000465563 HCFC1R1Q9NWW0 138 aa4.87□□□□□ -1.63
SMC4-205ENST00000465563 FBXO9Q9UK97 447 aaPredicted RBP4.87□□□□□ -1.63
SMC4-205ENST00000465563 FAM96BQ9Y3D0 163 aa4.87□□□□□ -1.63
SMC4-205ENST00000465563 HEXAP06865 529 aa4.86□□□□□ -1.63
SMC4-205ENST00000465563 CORO1AP31146 461 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms