RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 NXPH1P58417 271 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 RPL26P61254 145 aaKnown RBP17.54■□□□□ 0.4
CPSF4-209ENST00000465132 PPP2CBP62714 309 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 PPP2CAP67775 309 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 MPP3Q13368 585 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 PPP1R7Q15435 360 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 ZNF805Q5CZA5 627 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 ATXN7L2Q5T6C5 722 aaPredicted RBP17.54■□□□□ 0.4
CPSF4-209ENST00000465132 TBC1D3GQ6DHY5 549 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 TBC1D3CQ6IPX1 549 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.54■□□□□ 0.4
CPSF4-209ENST00000465132 ZNF572Q7Z3I7 529 aaPredicted RBP17.54■□□□□ 0.4
CPSF4-209ENST00000465132 TBC1D3Q8IZP1 549 aaPredicted RBP17.54■□□□□ 0.4
CPSF4-209ENST00000465132 SPATA4Q8NEY3 305 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 PIP4K2CQ8TBX8 421 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 SLCO2A1Q92959 643 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 RAB7BQ96AH8 199 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 FAM131CQ96AQ9 280 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 IMP4Q96G21 291 aaKnown RBP17.54■□□□□ 0.4
CPSF4-209ENST00000465132 EXOC2Q96KP1 924 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 GBA3Q9H227 469 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 SUV39H2Q9H5I1 410 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 PCDH9Q9HC56 1237 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 DKK3Q9UBP4 350 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 FAM153AQ9UHL3 310 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 RPL26L1Q9UNX3 145 aaKnown RBP17.54■□□□□ 0.4
CPSF4-209ENST00000465132 MRFAP1Q9Y605 127 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 ACTL7AQ9Y615 435 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 A0A087WV48 116 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 CTAGE15A4D2H0 777 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 E7EVH7 732 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 AP3B1O00203 1094 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 FANCGO15287 622 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 LEFTY1O75610 366 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 C1SP09871 688 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 CTAGE8P0CG41 777 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 ITGB7P26010 798 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 METAP1P53582 386 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 TUBB4BP68371 445 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 DR1Q01658 176 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 DNAJC3Q13217 504 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 ARSIQ5FYB1 569 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 NAPEPLDQ6IQ20 393 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 FBXL19Q6PCT2 694 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 CTAGE6Q86UF2 777 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 CTAGE4Q8IX94 777 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 EID2Q8N6I1 236 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 CNTD1Q8N815 330 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 MFSD2AQ8NA29 543 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 GRIN3AQ8TCU5 1115 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 IFT43Q96FT9 208 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 FSD1LQ9BXM9 530 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 ERVMER34-1Q9H9K5 563 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 NOD2Q9HC29 1040 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 NBEAQ8NFP9 2946 aa17.53■□□□□ 0.4
CPSF4-209ENST00000465132 GOLGA4Q13439 2230 aaKnown RBP17.52■□□□□ 0.4
CPSF4-209ENST00000465132 FASNP49327 2511 aaKnown RBP17.52■□□□□ 0.4
CPSF4-209ENST00000465132 PLK4O00444 970 aa17.52■□□□□ 0.4
CPSF4-209ENST00000465132 RFPL3O75679 317 aa17.52■□□□□ 0.4
CPSF4-209ENST00000465132 EPOP01588 193 aa17.52■□□□□ 0.4
CPSF4-209ENST00000465132 CDK4P11802 303 aa17.52■□□□□ 0.4
CPSF4-209ENST00000465132 NFKB1P19838 968 aa17.52■□□□□ 0.4
CPSF4-209ENST00000465132 RXRGP48443 463 aa17.52■□□□□ 0.4
CPSF4-209ENST00000465132 LMAN1P49257 510 aa17.52■□□□□ 0.4
CPSF4-209ENST00000465132 ACADVLP49748 655 aa17.52■□□□□ 0.4
CPSF4-209ENST00000465132 EPHB1P54762 984 aa17.52■□□□□ 0.4
CPSF4-209ENST00000465132 MAXP61244 160 aa17.52■□□□□ 0.4
CPSF4-209ENST00000465132 ARMC12Q5T9G4 340 aa17.52■□□□□ 0.4
CPSF4-209ENST00000465132 ERAP2Q6P179 960 aa17.52■□□□□ 0.4
CPSF4-209ENST00000465132 LINC00523Q86TU6 105 aa17.52■□□□□ 0.4
CPSF4-209ENST00000465132 PGBD5Q8N414 524 aa17.52■□□□□ 0.4
CPSF4-209ENST00000465132 SPOCK2Q92563 424 aa17.52■□□□□ 0.4
CPSF4-209ENST00000465132 HDAC8Q9BY41 377 aa17.52■□□□□ 0.4
CPSF4-209ENST00000465132 KDM4CQ9H3R0 1056 aa17.52■□□□□ 0.4
CPSF4-209ENST00000465132 SARDHQ9UL12 918 aa17.52■□□□□ 0.4
CPSF4-209ENST00000465132 WASF2Q9Y6W5 498 aa17.52■□□□□ 0.4
CPSF4-209ENST00000465132 ANKRD36A6QL64 1941 aa17.52■□□□□ 0.4
CPSF4-209ENST00000465132 URB1O60287 2271 aaKnown RBP17.51■□□□□ 0.39
CPSF4-209ENST00000465132 PLRG1O43660 514 aaKnown RBP17.51■□□□□ 0.39
CPSF4-209ENST00000465132 KRT14P02533 472 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 UGT2B4P06133 528 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 JUPP14923 745 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 HNF1BP35680 557 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 CD86P42081 329 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 NEK3P51956 506 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 CLDN6P56747 220 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 SARNPP82979 210 aaKnown RBP17.51■□□□□ 0.39
CPSF4-209ENST00000465132 DSC2Q02487 901 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 ELP6Q0PNE2 266 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 BNIP3Q12983 259 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 B4GALNT4Q76KP1 1039 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 ERN2Q76MJ5 926 aaKnown RBP17.51■□□□□ 0.39
CPSF4-209ENST00000465132 KANSL1Q7Z3B3 1105 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 PCGF5Q86SE9 256 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 PRPF39Q86UA1 669 aaKnown RBP17.51■□□□□ 0.39
CPSF4-209ENST00000465132 SPATS2Q86XZ4 545 aaKnown RBP17.51■□□□□ 0.39
CPSF4-209ENST00000465132 KLHL7Q8IXQ5 586 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 OXR1Q8N573 874 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 CHST14Q8NCH0 376 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 OR6K2Q8NGY2 324 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms