RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 ZCCHC2Q9C0B9 1178 aaKnown RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 CLPBQ9H078 707 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 PRO3102Q9H379 93 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 SSU72Q9NP77 194 aaKnown RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 INTS10Q9NVR2 710 aaKnown RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 TAS2R13Q9NYV9 303 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 MOCS1Q9NZB8 636 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 THAP10Q9P2Z0 257 aaPredicted RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 DKK3Q9UBP4 350 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 LGALS13Q9UHV8 139 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 INTS6Q9UL03 887 aaKnown RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 SLC39A10Q9ULF5 831 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 ANKRD6Q9Y2G4 727 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 ACOT9Q9Y305 439 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 ZNF711Q9Y462 761 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 ATG2BQ96BY7 2078 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 KIAA1549LQ6ZVL6 1849 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 CEP290O15078 2479 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 A0A087X1B8 175 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 GLYATL1P3A0A0U1RQE8 302 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 RGSL1A5PLK6 1076 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 CAPN8A6NHC0 703 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 FAM47DPA6NHR8 397 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 FAM159BA6NKW6 160 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 C16orf96A6NNT2 1141 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 C2CD4DB7Z1M9 353 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 WASH3PC4AMC7 463 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 TRIM49D1C9J1S8 452 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 PSMD11O00231 422 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 GIPC1O14908 333 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 HTRA2O43464 458 aaPredicted RBP5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 TSPAN6O43657 245 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 GLRA3O75311 464 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 PIGNO95427 931 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 SYF2O95926 243 aaKnown RBP5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 S100BP04271 92 aaPredicted RBP5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 MMP2P08253 660 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 GSTA1P08263 222 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 ITGA2BP08514 1039 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 PIRTP0C851 137 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 COL6A2P12110 1019 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 CR2P20023 1033 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 CHRM3P20309 590 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 ITGB7P26010 798 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 AKT1P31749 480 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 VIPR1P32241 457 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 SLC8A1P32418 973 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 CTHP32929 405 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 LTBRP36941 435 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 PTGER3P43115 390 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 RGS4P49798 205 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 CLCN5P51795 746 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 SEC13P55735 322 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 CBX1P83916 185 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 PRKCQQ04759 706 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 ZBTB16Q05516 673 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 TRAF2Q12933 501 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 GTF2H3Q13889 308 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 PON2Q15165 354 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 QPCTQ16769 361 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 KCTD19Q17RG1 926 aaPredicted RBP5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 FAM83EQ2M2I3 478 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 TSNAXIP1Q2TAA8 658 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 CCDC153Q494R4 210 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 SLC44A4Q53GD3 710 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 AGAP9Q5VTM2 703 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 RNF43Q68DV7 783 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 FAM45BPQ6NSW5 357 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 ESRP1Q6NXG1 681 aaKnown RBP5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 PACS1Q6VY07 963 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 ZNF534Q76KX8 674 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 SNX20Q7Z614 316 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 RAB44Q7Z6P3 723 aaPredicted RBP5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 CPLX4Q7Z7G2 160 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 KBTBD6Q86V97 674 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 MMAAQ8IVH4 418 aaKnown RBP5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 ETFBKMTQ8IXQ9 262 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 RBFAQ8N0V3 343 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 CBARPQ8N350 705 aaPredicted RBP5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 SYNPOQ8N3V7 929 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 AFAP1L2Q8N4X5 818 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 ANKS4BQ8N8V4 417 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 ANKRD42Q8N9B4 389 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 OR2A12Q8NGT7 310 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 FAM45AQ8TCE6 357 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 ZNF398Q8TD17 642 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 SORCS1Q8WY21 1168 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 CCDC126Q96EE4 140 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 CDKN2AIPNLQ96HQ2 116 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 LRCH3Q96II8 777 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 PLEKHG4BQ96PX9 1271 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 RBBP8Q99708 897 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 SH3GL2Q99962 352 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 ZSCAN5AQ9BUG6 496 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 SPATA16Q9BXB7 569 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 TRIM54Q9BYV2 358 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 PLA2G2FQ9BZM2 168 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 SLC13A1Q9BZW2 595 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 VPS11Q9H270 941 aa5.84□□□□□ -1.47
RNU1-88P-201ENST00000459274 MFSD1Q9H3U5 465 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms