RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 PAAF1Q9BRP4 392 aa7.67□□□□□ -1.18
HDAC9-218ENST00000456174 CNPY3Q9BT09 278 aa7.67□□□□□ -1.18
HDAC9-218ENST00000456174 EFHD1Q9BUP0 239 aa7.67□□□□□ -1.18
HDAC9-218ENST00000456174 GON7Q9BXV9 100 aa7.67□□□□□ -1.18
HDAC9-218ENST00000456174 B3GNT5Q9BYG0 378 aa7.67□□□□□ -1.18
HDAC9-218ENST00000456174 KCNN2Q9H2S1 579 aa7.67□□□□□ -1.18
HDAC9-218ENST00000456174 SLA2Q9H6Q3 261 aa7.67□□□□□ -1.18
HDAC9-218ENST00000456174 COPS7BQ9H9Q2 264 aaPredicted RBP7.67□□□□□ -1.18
HDAC9-218ENST00000456174 LIN7BQ9HAP6 207 aa7.67□□□□□ -1.18
HDAC9-218ENST00000456174 MAGEE1Q9HCI5 957 aa7.67□□□□□ -1.18
HDAC9-218ENST00000456174 TXNDC16Q9P2K2 825 aa7.67□□□□□ -1.18
HDAC9-218ENST00000456174 TNFRSF10DQ9UBN6 386 aa7.67□□□□□ -1.18
HDAC9-218ENST00000456174 VPS28Q9UK41 221 aa7.67□□□□□ -1.18
HDAC9-218ENST00000456174 PRPF19Q9UMS4 504 aaKnown RBP7.67□□□□□ -1.18
HDAC9-218ENST00000456174 hCG_1818297A0A087WSY0 165 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 TK2O00142 265 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 TRUB2O95900 331 aaKnown RBP7.66□□□□□ -1.18
HDAC9-218ENST00000456174 LCP1P13796 627 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 PTPN7P35236 360 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 CDKN2BP42772 138 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 LHX1P48742 406 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 RPL34P49207 117 aaKnown RBP7.66□□□□□ -1.18
HDAC9-218ENST00000456174 AQP5P55064 265 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 MAP3K7CLP57077 242 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 TARDBPQ13148 414 aaKnown RBP eCLIP7.66□□□□□ -1.18
HDAC9-218ENST00000456174 IKBKEQ14164 716 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 MBTPS1Q14703 1052 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 HERC3Q15034 1050 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 CDO1Q16878 200 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 TEX44Q53QW1 395 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 SH3PXD2AQ5TCZ1 1133 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 TRAF7Q6Q0C0 670 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 BTLAQ7Z6A9 289 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 CLYBLQ8N0X4 340 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 PARP8Q8N3A8 854 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 FBXL6Q8N531 539 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 GALNT11Q8NCW6 608 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 ANKRD49Q8WVL7 239 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 KHSRPQ92945 711 aaKnown RBP eCLIP7.66□□□□□ -1.18
HDAC9-218ENST00000456174 REXO5Q96IC2 774 aaKnown RBP7.66□□□□□ -1.18
HDAC9-218ENST00000456174 FAM118BQ9BPY3 351 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 TMEM79Q9BSE2 394 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 NAA50Q9GZZ1 169 aaKnown RBP7.66□□□□□ -1.18
HDAC9-218ENST00000456174 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.66□□□□□ -1.18
HDAC9-218ENST00000456174 ALG13Q9NP73 1137 aaKnown RBP7.66□□□□□ -1.18
HDAC9-218ENST00000456174 SAGE1Q9NXZ1 904 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 USP18Q9UMW8 372 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 AP3M1Q9Y2T2 418 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 TIMM13Q9Y5L4 95 aaPredicted RBP7.66□□□□□ -1.18
HDAC9-218ENST00000456174 C3orf70A6NLC5 250 aaPredicted RBP7.66□□□□□ -1.18
HDAC9-218ENST00000456174 CLDN5O00501 218 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 LPXNO60711 386 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 FAM155BO75949 473 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 KDELR1P24390 212 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 MAP4P27816 1152 aaKnown RBP7.66□□□□□ -1.18
HDAC9-218ENST00000456174 OR3A3P47888 321 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 EIF3EP60228 445 aaKnown RBP7.66□□□□□ -1.18
HDAC9-218ENST00000456174 OTUD4Q01804 1114 aaKnown RBP7.66□□□□□ -1.18
HDAC9-218ENST00000456174 MAPRE2Q15555 327 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 TIGD5Q53EQ6 642 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 KIAA0319Q5VV43 1072 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 RTN4RL1Q86UN2 441 aaPredicted RBP7.66□□□□□ -1.18
HDAC9-218ENST00000456174 ARID3BQ8IVW6 561 aaPredicted RBP7.66□□□□□ -1.18
HDAC9-218ENST00000456174 KCTD6Q8NC69 237 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 CLEC4CQ8WTT0 213 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 PMEPA1Q969W9 287 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 HSFY1Q96LI6 401 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 PHOX2BQ99453 314 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 DUSP16Q9BY84 665 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 SLC13A1Q9BZW2 595 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 NOL6Q9H6R4 1146 aaKnown RBP7.66□□□□□ -1.18
HDAC9-218ENST00000456174 ATP13A3Q9H7F0 1226 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 CCSER2Q9H7U1 834 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 RGS18Q9NS28 235 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 GIMAP4Q9NUV9 329 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 PSME2Q9UL46 239 aa7.66□□□□□ -1.18
HDAC9-218ENST00000456174 A8MX80 341 aa7.65□□□□□ -1.18
HDAC9-218ENST00000456174 C9IYK1 514 aa7.65□□□□□ -1.18
HDAC9-218ENST00000456174 PRPSAP2O60256 369 aa7.65□□□□□ -1.18
HDAC9-218ENST00000456174 SNNO75324 88 aaPredicted RBP7.65□□□□□ -1.18
HDAC9-218ENST00000456174 RFPL2O75678 378 aa7.65□□□□□ -1.18
HDAC9-218ENST00000456174 B3GAT3O94766 335 aa7.65□□□□□ -1.18
HDAC9-218ENST00000456174 CPNE6O95741 557 aa7.65□□□□□ -1.18
HDAC9-218ENST00000456174 MYL4P12829 197 aa7.65□□□□□ -1.18
HDAC9-218ENST00000456174 JUNBP17275 347 aaPredicted RBP7.65□□□□□ -1.18
HDAC9-218ENST00000456174 KLRC2P26717 231 aa7.65□□□□□ -1.18
HDAC9-218ENST00000456174 SDC4P31431 198 aa7.65□□□□□ -1.18
HDAC9-218ENST00000456174 LEPRP48357 1165 aaKnown RBP7.65□□□□□ -1.18
HDAC9-218ENST00000456174 SLC9A3P48764 834 aa7.65□□□□□ -1.18
HDAC9-218ENST00000456174 HCAR3P49019 387 aa7.65□□□□□ -1.18
HDAC9-218ENST00000456174 MRPS22P82650 360 aaKnown RBP7.65□□□□□ -1.18
HDAC9-218ENST00000456174 OCA2Q04671 838 aa7.65□□□□□ -1.18
HDAC9-218ENST00000456174 NME3Q13232 169 aa7.65□□□□□ -1.18
HDAC9-218ENST00000456174 TUSC3Q13454 348 aa7.65□□□□□ -1.18
HDAC9-218ENST00000456174 DNASE1L3Q13609 305 aa7.65□□□□□ -1.18
HDAC9-218ENST00000456174 PAN2Q504Q3 1202 aaKnown RBP7.65□□□□□ -1.18
HDAC9-218ENST00000456174 RAB6CQ53S08 254 aa7.65□□□□□ -1.18
HDAC9-218ENST00000456174 KIAA0408Q6ZU52 694 aa7.65□□□□□ -1.18
HDAC9-218ENST00000456174 DENND5BQ6ZUT9 1274 aa7.65□□□□□ -1.18
HDAC9-218ENST00000456174 SH2D5Q6ZV89 423 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms