RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 ETFBKMTQ8IXQ9 262 aa15.93■□□□□ 0.14
SNX17-204ENST00000453453 PGBD5Q8N414 524 aa15.93■□□□□ 0.14
SNX17-204ENST00000453453 IPMKQ8NFU5 416 aa15.93■□□□□ 0.14
SNX17-204ENST00000453453 SPATA22Q8NHS9 363 aa15.93■□□□□ 0.14
SNX17-204ENST00000453453 SLC44A1Q8WWI5 657 aa15.93■□□□□ 0.14
SNX17-204ENST00000453453 TBL1YQ9BQ87 522 aa15.93■□□□□ 0.14
SNX17-204ENST00000453453 SCUBE2Q9NQ36 999 aa15.93■□□□□ 0.14
SNX17-204ENST00000453453 NDE1Q9NXR1 346 aa15.93■□□□□ 0.14
SNX17-204ENST00000453453 UBP1Q9NZI7 540 aa15.93■□□□□ 0.14
SNX17-204ENST00000453453 TAGLN3Q9UI15 199 aa15.93■□□□□ 0.14
SNX17-204ENST00000453453 SLC8A2Q9UPR5 921 aa15.93■□□□□ 0.14
SNX17-204ENST00000453453 ACTL7AQ9Y615 435 aa15.93■□□□□ 0.14
SNX17-204ENST00000453453 SPECC1L-ADORA2AF8WAN1 911 aa15.92■□□□□ 0.14
SNX17-204ENST00000453453 PMPCBO75439 489 aa15.92■□□□□ 0.14
SNX17-204ENST00000453453 CISD3P0C7P0 127 aa15.92■□□□□ 0.14
SNX17-204ENST00000453453 ANPEPP15144 967 aa15.92■□□□□ 0.14
SNX17-204ENST00000453453 NSUN2Q08J23 767 aaKnown RBP eCLIP15.92■□□□□ 0.14
SNX17-204ENST00000453453 THOC5Q13769 683 aaKnown RBP15.92■□□□□ 0.14
SNX17-204ENST00000453453 BBS9Q3SYG4 887 aa15.92■□□□□ 0.14
SNX17-204ENST00000453453 LEXMQ3ZCV2 418 aa15.92■□□□□ 0.14
SNX17-204ENST00000453453 FOXB2Q5VYV0 432 aa15.92■□□□□ 0.14
SNX17-204ENST00000453453 KCTD11Q693B1 232 aa15.92■□□□□ 0.14
SNX17-204ENST00000453453 LRRC8BQ6P9F7 803 aa15.92■□□□□ 0.14
SNX17-204ENST00000453453 SH2D5Q6ZV89 423 aa15.92■□□□□ 0.14
SNX17-204ENST00000453453 NUDT18Q6ZVK8 323 aa15.92■□□□□ 0.14
SNX17-204ENST00000453453 ACAD11Q709F0 780 aa15.92■□□□□ 0.14
SNX17-204ENST00000453453 ADIPOR2Q86V24 386 aa15.92■□□□□ 0.14
SNX17-204ENST00000453453 SCUBE1Q8IWY4 988 aa15.92■□□□□ 0.14
SNX17-204ENST00000453453 KLHDC8BQ8IXV7 354 aa15.92■□□□□ 0.14
SNX17-204ENST00000453453 ST13P4Q8IZP2 240 aaPredicted RBP15.92■□□□□ 0.14
SNX17-204ENST00000453453 TTC17Q96AE7 1141 aa15.92■□□□□ 0.14
SNX17-204ENST00000453453 ECSITQ9BQ95 431 aa15.92■□□□□ 0.14
SNX17-204ENST00000453453 CIPCQ9C0C6 399 aa15.92■□□□□ 0.14
SNX17-204ENST00000453453 STN1Q9H668 368 aaKnown RBP15.92■□□□□ 0.14
SNX17-204ENST00000453453 GTSE1Q9NYZ3 720 aa15.92■□□□□ 0.14
SNX17-204ENST00000453453 ZNF180Q9UJW8 692 aa15.92■□□□□ 0.14
SNX17-204ENST00000453453 PLA2G4CQ9UP65 541 aa15.92■□□□□ 0.14
SNX17-204ENST00000453453 HS3ST2Q9Y278 367 aa15.92■□□□□ 0.14
SNX17-204ENST00000453453 FCF1Q9Y324 198 aaKnown RBP15.92■□□□□ 0.14
SNX17-204ENST00000453453 TICRRQ7Z2Z1 1910 aa15.92■□□□□ 0.14
SNX17-204ENST00000453453 COL4A3Q01955 1670 aa15.92■□□□□ 0.14
SNX17-204ENST00000453453 MAP3K13O43283 966 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 TIMM44O43615 452 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 CD160O95971 181 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 IGSF6O95976 241 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 MT-CYBP00156 380 aaPredicted RBP15.91■□□□□ 0.14
SNX17-204ENST00000453453 GJA4P35212 333 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 CCNFP41002 786 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 EIF2DP41214 584 aaKnown RBP15.91■□□□□ 0.14
SNX17-204ENST00000453453 MAPK8P45983 427 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 SERPINB4P48594 390 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 SCNN1BP51168 640 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 IRX4P78413 519 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 KDSRQ06136 332 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 NIPAL4Q0D2K0 466 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 EIF4HQ15056 248 aaKnown RBP15.91■□□□□ 0.14
SNX17-204ENST00000453453 SMAD2Q15796 467 aaKnown RBP15.91■□□□□ 0.14
SNX17-204ENST00000453453 FNBP1LQ5T0N5 605 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 C3orf62Q6ZUJ4 267 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 C12orf40Q86WS4 652 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 PALM2Q8IXS6 379 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 DNAAF3Q8N9W5 541 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 ARRDC2Q8TBH0 407 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 WDR60Q8WVS4 1066 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 LRRC39Q96DD0 335 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 RPP25Q9BUL9 199 aaKnown RBP15.91■□□□□ 0.14
SNX17-204ENST00000453453 FICDQ9BVA6 458 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 CEP44Q9C0F1 390 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 SLC17A7Q9P2U7 560 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 LHX3Q9UBR4 397 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 ERVW-1Q9UQF0 538 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 IKBKGQ9Y6K9 419 aa15.91■□□□□ 0.14
SNX17-204ENST00000453453 OTOL1A6NHN0 477 aaPredicted RBP15.9■□□□□ 0.14
SNX17-204ENST00000453453 MUSKO15146 869 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 INSIG1O15503 277 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 MT-CO1P00395 513 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 SRPRAP08240 638 aaKnown RBP15.9■□□□□ 0.14
SNX17-204ENST00000453453 MYL2P10916 166 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 SRCP12931 536 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 CTSOP43234 321 aaPredicted RBP15.9■□□□□ 0.14
SNX17-204ENST00000453453 SLC6A11P48066 632 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 POLE2P56282 527 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 WNT3AP56704 352 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 ST8SIA6P61647 398 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 AP1S1P61966 158 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 CDH17Q12864 832 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 LAMB3Q13751 1172 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 PCSK7Q16549 785 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 GEN1Q17RS7 908 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 GAB4Q2WGN9 574 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 LGSNQ5TDP6 509 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 PRPF39Q86UA1 669 aaKnown RBP15.9■□□□□ 0.14
SNX17-204ENST00000453453 CAND1Q86VP6 1230 aaKnown RBP15.9■□□□□ 0.14
SNX17-204ENST00000453453 FBXO36Q8NEA4 188 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 JADE3Q92613 823 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 ISG20Q96AZ6 181 aaKnown RBP15.9■□□□□ 0.14
SNX17-204ENST00000453453 EXOC2Q96KP1 924 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 RPL10LQ96L21 214 aaKnown RBP15.9■□□□□ 0.14
SNX17-204ENST00000453453 SPATA16Q9BXB7 569 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 BFARQ9NZS9 450 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms