RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 RPTORQ8N122 1335 aa8.01□□□□□ -1.13
RIF1-205ENST00000444746 PIPSLA2A3N6 862 aa8.01□□□□□ -1.13
RIF1-205ENST00000444746 KRT87PA6NCN2 255 aa8.01□□□□□ -1.13
RIF1-205ENST00000444746 PER2O15055 1255 aa8.01□□□□□ -1.13
RIF1-205ENST00000444746 ITM2AO43736 263 aa8.01□□□□□ -1.13
RIF1-205ENST00000444746 EDF1O60869 148 aaKnown RBP8.01□□□□□ -1.13
RIF1-205ENST00000444746 DBTP11182 482 aaKnown RBP8.01□□□□□ -1.13
RIF1-205ENST00000444746 CSTF3Q12996 717 aaKnown RBP8.01□□□□□ -1.13
RIF1-205ENST00000444746 NT5DC4Q86YG4 428 aa8.01□□□□□ -1.13
RIF1-205ENST00000444746 CNPY4Q8N129 248 aa8.01□□□□□ -1.13
RIF1-205ENST00000444746 OR52J3Q8NH60 311 aa8.01□□□□□ -1.13
RIF1-205ENST00000444746 PCDH19Q8TAB3 1148 aa8.01□□□□□ -1.13
RIF1-205ENST00000444746 FNIP1Q8TF40 1166 aa8.01□□□□□ -1.13
RIF1-205ENST00000444746 TTYH3Q9C0H2 523 aa8.01□□□□□ -1.13
RIF1-205ENST00000444746 NOL11Q9H8H0 719 aaKnown RBP8.01□□□□□ -1.13
RIF1-205ENST00000444746 ADPRHL2Q9NX46 363 aa8.01□□□□□ -1.13
RIF1-205ENST00000444746 NCKAP1Q9Y2A7 1128 aa8.01□□□□□ -1.13
RIF1-205ENST00000444746 CFAP20Q9Y6A4 193 aaKnown RBP8.01□□□□□ -1.13
RIF1-205ENST00000444746 PTPRJQ12913 1337 aa8.01□□□□□ -1.13
RIF1-205ENST00000444746 UBXN8O00124 270 aa8.01□□□□□ -1.13
RIF1-205ENST00000444746 AZIN1O14977 448 aa8.01□□□□□ -1.13
RIF1-205ENST00000444746 GGT5P36269 586 aa8.01□□□□□ -1.13
RIF1-205ENST00000444746 RNF144AP50876 292 aaPredicted RBP8.01□□□□□ -1.13
RIF1-205ENST00000444746 THOP1P52888 689 aa8.01□□□□□ -1.13
RIF1-205ENST00000444746 ZSWIM7Q19AV6 140 aa8.01□□□□□ -1.13
RIF1-205ENST00000444746 CASP12Q6UXS9 341 aa8.01□□□□□ -1.13
RIF1-205ENST00000444746 C2orf49Q9BVC5 232 aaPredicted RBP8.01□□□□□ -1.13
RIF1-205ENST00000444746 MFSD1Q9H3U5 465 aa8.01□□□□□ -1.13
RIF1-205ENST00000444746 RAD21L1Q9H4I0 556 aa8.01□□□□□ -1.13
RIF1-205ENST00000444746 DHX33Q9H6R0 707 aaKnown RBP8.01□□□□□ -1.13
RIF1-205ENST00000444746 ATP13A3Q9H7F0 1226 aa8.01□□□□□ -1.13
RIF1-205ENST00000444746 ZNF490Q9ULM2 529 aaPredicted RBP8.01□□□□□ -1.13
RIF1-205ENST00000444746 SMIM35A0A1B0GVV1 85 aa8□□□□□ -1.13
RIF1-205ENST00000444746 CNOT3O75175 753 aaKnown RBP8□□□□□ -1.13
RIF1-205ENST00000444746 TCF3P15923 654 aa8□□□□□ -1.13
RIF1-205ENST00000444746 GABRB2P47870 512 aa8□□□□□ -1.13
RIF1-205ENST00000444746 FRG1Q14331 258 aaKnown RBP8□□□□□ -1.13
RIF1-205ENST00000444746 CAPNS2Q96L46 248 aa8□□□□□ -1.13
RIF1-205ENST00000444746 UROC1Q96N76 676 aa8□□□□□ -1.13
RIF1-205ENST00000444746 BATF3Q9NR55 127 aa8□□□□□ -1.13
RIF1-205ENST00000444746 BTNL10A8MVZ5 291 aa8□□□□□ -1.13
RIF1-205ENST00000444746 OR4F21O95013 312 aa8□□□□□ -1.13
RIF1-205ENST00000444746 CST1P01037 141 aa8□□□□□ -1.13
RIF1-205ENST00000444746 CAPN1P07384 714 aa8□□□□□ -1.13
RIF1-205ENST00000444746 LPOP22079 712 aaPredicted RBP8□□□□□ -1.13
RIF1-205ENST00000444746 PTPN3P26045 913 aa8□□□□□ -1.13
RIF1-205ENST00000444746 LILRA4P59901 499 aa8□□□□□ -1.13
RIF1-205ENST00000444746 CYP2A13Q16696 494 aa8□□□□□ -1.13
RIF1-205ENST00000444746 GPR107Q5VW38 600 aa8□□□□□ -1.13
RIF1-205ENST00000444746 TMC5Q6UXY8 1006 aa8□□□□□ -1.13
RIF1-205ENST00000444746 ZNF438Q7Z4V0 828 aa8□□□□□ -1.13
RIF1-205ENST00000444746 TMPRSS11BQ86T26 416 aa8□□□□□ -1.13
RIF1-205ENST00000444746 ULK2Q8IYT8 1036 aa8□□□□□ -1.13
RIF1-205ENST00000444746 UBASH3BQ8TF42 649 aa8□□□□□ -1.13
RIF1-205ENST00000444746 CXorf40BQ96DE9 158 aa8□□□□□ -1.13
RIF1-205ENST00000444746 PHF12Q96QT6 1004 aa8□□□□□ -1.13
RIF1-205ENST00000444746 SDCBP2Q9H190 292 aa8□□□□□ -1.13
RIF1-205ENST00000444746 ZNF214Q9UL59 606 aaPredicted RBP8□□□□□ -1.13
RIF1-205ENST00000444746 VPS4AQ9UN37 437 aa8□□□□□ -1.13
RIF1-205ENST00000444746 MRPS7Q9Y2R9 242 aaKnown RBP8□□□□□ -1.13
RIF1-205ENST00000444746 AK9Q5TCS8 1911 aa8□□□□□ -1.13
RIF1-205ENST00000444746 FAM220BPB1ANY3 271 aa8□□□□□ -1.13
RIF1-205ENST00000444746 TMEM233B4DJY2 109 aa8□□□□□ -1.13
RIF1-205ENST00000444746 HNRNPH3P31942 346 aaKnown RBP8□□□□□ -1.13
RIF1-205ENST00000444746 RPS24P62847 133 aaKnown RBP8□□□□□ -1.13
RIF1-205ENST00000444746 PDK3Q15120 406 aa8□□□□□ -1.13
RIF1-205ENST00000444746 PHKG1Q16816 387 aa8□□□□□ -1.13
RIF1-205ENST00000444746 FBXW8Q8N3Y1 598 aa8□□□□□ -1.13
RIF1-205ENST00000444746 FAM110BQ8TC76 370 aa8□□□□□ -1.13
RIF1-205ENST00000444746 ASZ1Q8WWH4 475 aa8□□□□□ -1.13
RIF1-205ENST00000444746 PANX3Q96QZ0 392 aa8□□□□□ -1.13
RIF1-205ENST00000444746 SLC25A23Q9BV35 468 aa8□□□□□ -1.13
RIF1-205ENST00000444746 J3KR12 359 aa8□□□□□ -1.13
RIF1-205ENST00000444746 B4GALT4O60513 344 aa8□□□□□ -1.13
RIF1-205ENST00000444746 CLTBP09497 229 aa8□□□□□ -1.13
RIF1-205ENST00000444746 POU2F1P14859 743 aa8□□□□□ -1.13
RIF1-205ENST00000444746 CLCN5P51795 746 aa8□□□□□ -1.13
RIF1-205ENST00000444746 SPIBQ01892 262 aa8□□□□□ -1.13
RIF1-205ENST00000444746 USP39Q53GS9 565 aaKnown RBP8□□□□□ -1.13
RIF1-205ENST00000444746 LRRC38Q5VT99 294 aa8□□□□□ -1.13
RIF1-205ENST00000444746 C12orf50Q8NA57 414 aaPredicted RBP8□□□□□ -1.13
RIF1-205ENST00000444746 ATP6V1C2Q8NEY4 427 aa8□□□□□ -1.13
RIF1-205ENST00000444746 ZNF398Q8TD17 642 aa8□□□□□ -1.13
RIF1-205ENST00000444746 PIWIL1Q96J94 861 aaKnown RBP8□□□□□ -1.13
RIF1-205ENST00000444746 CCSER2Q9H7U1 834 aa8□□□□□ -1.13
RIF1-205ENST00000444746 GIMAP2Q9UG22 337 aa8□□□□□ -1.13
RIF1-205ENST00000444746 STXBP5LQ9Y2K9 1186 aa8□□□□□ -1.13
RIF1-205ENST00000444746 HIPK1Q86Z02 1210 aa8□□□□□ -1.13
RIF1-205ENST00000444746 CYB5D2Q8WUJ1 264 aa8□□□□□ -1.13
RIF1-205ENST00000444746 PMEPA1Q969W9 287 aa8□□□□□ -1.13
RIF1-205ENST00000444746 ART5Q96L15 291 aa8□□□□□ -1.13
RIF1-205ENST00000444746 EIF2B4Q9UI10 523 aaKnown RBP8□□□□□ -1.13
RIF1-205ENST00000444746 FZD10Q9ULW2 581 aa8□□□□□ -1.13
RIF1-205ENST00000444746 A0A1W2PRU2 124 aa8□□□□□ -1.13
RIF1-205ENST00000444746 GNB5O14775 395 aa8□□□□□ -1.13
RIF1-205ENST00000444746 ULK1O75385 1050 aa8□□□□□ -1.13
RIF1-205ENST00000444746 ACVRL1P37023 503 aa8□□□□□ -1.13
RIF1-205ENST00000444746 GLUD2P49448 558 aa8□□□□□ -1.13
RIF1-205ENST00000444746 PPP1R8Q12972 351 aaKnown RBP8□□□□□ -1.13
RIF1-205ENST00000444746 ITGADQ13349 1161 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms