RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 Q6ZVL8 140 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 LYSMD3Q7Z3D4 306 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 ZSCAN30Q86W11 494 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 TTC30BQ8N4P2 665 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 TTC13Q8NBP0 860 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 PTCD2Q8WV60 388 aaKnown RBP12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 UBE2Q2Q8WVN8 375 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 AGAP2Q99490 1192 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 VAT1Q99536 393 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 GAREM1Q9H706 876 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 FAM153AQ9UHL3 310 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 RSPH14Q9UHP6 348 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 RPL26L1Q9UNX3 145 aaKnown RBP12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 JRKLQ9Y4A0 524 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 CACNA1AO00555 2505 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 SPEGQ15772 3267 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 A6NNZ2 444 aa12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 CEP104O60308 925 aa12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 GCATO75600 419 aa12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 NDST3O95803 873 aa12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 AGTP01019 485 aa12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 PCCBP05166 539 aa12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 ZSCAN5DPP0CG00 497 aa12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 CA5AP35218 305 aa12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 CETN2P41208 172 aa12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 KCNJ1P48048 391 aa12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 POLR2LP62875 67 aaKnown RBP12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 ARHGAP8P85298 464 aa12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 BNIP3Q12983 259 aa12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 SNX1Q13596 522 aa12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 SIRPB2Q5JXA9 342 aa12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 ESRP1Q6NXG1 681 aaKnown RBP12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 USP45Q70EL2 814 aa12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 PTAR1Q7Z6K3 402 aaPredicted RBP12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 BAHD1Q8TBE0 780 aaPredicted RBP12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 ANP32BQ92688 251 aaKnown RBP12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 CAMK1GQ96NX5 476 aa12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 OSBPL9Q96SU4 736 aa12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 ELF4Q99607 663 aaPredicted RBP12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 LGR4Q9BXB1 951 aa12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 ZDHHC5Q9C0B5 715 aa12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 TCEAL2Q9H3H9 227 aaPredicted RBP12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 TRHDEQ9UKU6 1024 aa12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 SNX12Q9UMY4 172 aa12.85□□□□□ -0.35
PDLIM2-212ENST00000443561 SPTY2D1-AS1A0A0U1RR47 76 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 DCDC2BA2VCK2 349 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 PSMD11O00231 422 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 GIPC1O14908 333 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 FOXD2O60548 495 aaPredicted RBP12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 CBFA2T3O75081 653 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 USP12O75317 370 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 NEBLO76041 1014 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 FUCA1P04066 466 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 SYPP08247 313 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 ZNF883P0CG24 379 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 EPHA8P29322 1005 aaPredicted RBP12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 TRIM23P36406 574 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 OVGP1Q12889 678 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 SGCGQ13326 291 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 SPARCL1Q14515 664 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 INPP5AQ14642 412 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 STAT4Q14765 748 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 LRRC14Q15048 493 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 TEAD4Q15561 434 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 SLC1A5Q15758 541 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 UAP1L1Q3KQV9 507 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 ZNF542PQ5EBM4 170 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 DENND2CQ68D51 928 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 DRICH1Q6PGQ1 229 aaPredicted RBP12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 RANBP10Q6VN20 620 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 GATAD2AQ86YP4 633 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 TAB3Q8N5C8 712 aaPredicted RBP12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 IPMKQ8NFU5 416 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 SCAMP4Q969E2 229 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 NUS1Q96E22 293 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 KLHDC7BQ96G42 594 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 APOL2Q9BQE5 337 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 FICDQ9BVA6 458 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 ABCG8Q9H221 673 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 TM7SF3Q9NS93 570 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 UCKL1Q9NWZ5 548 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 CD84Q9UIB8 345 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 TTC7AQ9ULT0 858 aaPredicted RBP12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 ZNF711Q9Y462 761 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 OR1A2Q9Y585 309 aa12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 PCYT1BQ9Y5K3 369 aaPredicted RBP12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 ARHGEF17Q96PE2 2063 aaPredicted RBP12.84□□□□□ -0.35
PDLIM2-212ENST00000443561 SPTBN2O15020 2390 aa12.83□□□□□ -0.36
PDLIM2-212ENST00000443561 GOLGA6L9A6NEM1 432 aa12.83□□□□□ -0.36
PDLIM2-212ENST00000443561 FADS2P1A8MWK0 482 aa12.83□□□□□ -0.36
PDLIM2-212ENST00000443561 GAPDHSO14556 408 aaPredicted RBP12.83□□□□□ -0.36
PDLIM2-212ENST00000443561 LZTS3O60299 673 aaPredicted RBP12.83□□□□□ -0.36
PDLIM2-212ENST00000443561 OPHN1O60890 802 aa12.83□□□□□ -0.36
PDLIM2-212ENST00000443561 CER1O95813 267 aa12.83□□□□□ -0.36
PDLIM2-212ENST00000443561 CELA2BP08218 269 aaPredicted RBP12.83□□□□□ -0.36
PDLIM2-212ENST00000443561 CYP2A6P11509 494 aaPredicted RBP12.83□□□□□ -0.36
PDLIM2-212ENST00000443561 RXRGP48443 463 aa12.83□□□□□ -0.36
PDLIM2-212ENST00000443561 C21orf59P57076 290 aa12.83□□□□□ -0.36
PDLIM2-212ENST00000443561 MPP3Q13368 585 aa12.83□□□□□ -0.36
PDLIM2-212ENST00000443561 MTM1Q13496 603 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms