RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 Q8N9P0 234 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 NOA1Q8NC60 698 aaKnown RBP3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 FAM71BQ8TC56 605 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 ADAMTS18Q8TE60 1221 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 IPO4Q8TEX9 1081 aaKnown RBP3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 RUBCNQ92622 972 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 TAF4BQ92750 862 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 SLC35C1Q96A29 364 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZNF668Q96K58 619 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 CAPZA3Q96KX2 299 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 CCDC43Q96MW1 224 aaKnown RBP3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 ACCSQ96QU6 501 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 TAAR1Q96RJ0 339 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 IWS1Q96ST2 819 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 LXNQ9BS40 222 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 TIPINQ9BVW5 301 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 CIPCQ9C0C6 399 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 MS4A7Q9GZW8 240 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 CXorf36Q9H7Y0 433 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 TMEM206Q9H813 350 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 SLC38A10Q9HBR0 1119 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 RAVER2Q9HCJ3 691 aaKnown RBP3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 TM7SF3Q9NS93 570 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 GGA3Q9NZ52 723 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 LARSQ9P2J5 1176 aaKnown RBP3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 RNF14Q9UBS8 474 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 SNX12Q9UMY4 172 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 USP22Q9UPT9 525 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 CRYL1Q9Y2S2 319 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZHX2Q9Y6X8 837 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 ASTN1O14525 1302 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 TNS1Q9HBL0 1735 aaKnown RBP3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 SCN9AQ15858 1988 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 A0A087X0T9 212 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 A0A0U1RQG5 324 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 MBD3L4A6NDZ8 208 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 MBD3L3A6NE82 208 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 BTNL10A8MVZ5 291 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 B9A039 149 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 C19orf81C9J6K1 198 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 K7ENM7 598 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 PODXLO00592 558 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 PPEF2O14830 753 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 AREL1O15033 823 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 MAPK13O15264 365 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 POLR3GO15318 223 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 P4HA2O15460 535 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 IRAK2O43187 625 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 THAP12O43422 761 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 TMPRSS11DO60235 418 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 SNX2O60749 519 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 DKC1O60832 514 aaKnown RBP eCLIP3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 N4BP1O75113 896 aaKnown RBP3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 PALMO75781 387 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 GFPT2O94808 682 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 NDST3O95803 873 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 ITGA5P08648 1049 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 FAM228BP0C875 321 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 CKMT1AP12532 417 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 MYL4P12829 197 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 KLRC1P26715 233 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 MPGP29372 298 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 OAS2P29728 719 aaKnown RBP3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 CCND2P30279 289 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 YWHABP31946 246 aaKnown RBP3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 SFNP31947 248 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 MATR3P43243 847 aaKnown RBP eCLIP3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 QARSP47897 775 aaKnown RBP3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 CARSP49589 748 aaKnown RBP3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 GMPSP49915 693 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 CYP2J2P51589 502 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 OAZ1P54368 228 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 BACE1P56817 501 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 PSMC5P62195 406 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 GTF2BQ00403 316 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 C2orf54Q08AI8 447 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 CETN1Q12798 172 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 SPP2Q13103 211 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 ITGB3BPQ13352 177 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 CTBP1Q13363 440 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 CASP8Q14790 479 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 PGM5Q15124 567 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 RAB30Q15771 203 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 ETFDHQ16134 617 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 CFAP221Q4G0U5 840 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 GLE1Q53GS7 698 aaKnown RBP3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 PLA1AQ53H76 456 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 HSP90B2PQ58FF3 399 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 ARHGEF16Q5VV41 709 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 C11orf87Q6NUJ2 197 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 RETSATQ6NUM9 610 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 NFRKBQ6P4R8 1299 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZNF813Q6ZN06 617 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 INTS8Q75QN2 995 aaKnown RBP3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 OTUD6AQ7L8S5 288 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZNF571Q7Z3V5 609 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 HAUS6Q7Z4H7 955 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 C4orf19Q8IY42 314 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 SCYL3Q8IZE3 742 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms