RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 IRF4Q15306 451 aa16.93■□□□□ 0.3
TARDBP-203ENST00000439080 SLC1A5Q15758 541 aa16.93■□□□□ 0.3
TARDBP-203ENST00000439080 CCDC70Q6NSX1 233 aa16.93■□□□□ 0.3
TARDBP-203ENST00000439080 KYAT3Q6YP21 454 aaKnown RBP16.93■□□□□ 0.3
TARDBP-203ENST00000439080 HSD11B1LQ7Z5J1 315 aa16.93■□□□□ 0.3
TARDBP-203ENST00000439080 PTAR1Q7Z6K3 402 aaPredicted RBP16.93■□□□□ 0.3
TARDBP-203ENST00000439080 SLC25A41Q8N5S1 370 aa16.93■□□□□ 0.3
TARDBP-203ENST00000439080 COQ10AQ96MF6 247 aa16.93■□□□□ 0.3
TARDBP-203ENST00000439080 PAK5Q9P286 719 aa16.93■□□□□ 0.3
TARDBP-203ENST00000439080 ZNF711Q9Y462 761 aa16.93■□□□□ 0.3
TARDBP-203ENST00000439080 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.93■□□□□ 0.3
TARDBP-203ENST00000439080 GOLGA8CPA6NN73 597 aa16.92■□□□□ 0.3
TARDBP-203ENST00000439080 A6NNZ2 444 aa16.92■□□□□ 0.3
TARDBP-203ENST00000439080 FPGTO14772 594 aa16.92■□□□□ 0.3
TARDBP-203ENST00000439080 VILLO15195 856 aa16.92■□□□□ 0.3
TARDBP-203ENST00000439080 SLC4A1P02730 911 aa16.92■□□□□ 0.3
TARDBP-203ENST00000439080 FGF1P05230 155 aa16.92■□□□□ 0.3
TARDBP-203ENST00000439080 ENGP17813 658 aa16.92■□□□□ 0.3
TARDBP-203ENST00000439080 ADRA1AP35348 466 aa16.92■□□□□ 0.3
TARDBP-203ENST00000439080 COILP38432 576 aaPredicted RBP16.92■□□□□ 0.3
TARDBP-203ENST00000439080 ETV3P41162 512 aa16.92■□□□□ 0.3
TARDBP-203ENST00000439080 C21orf59P57076 290 aa16.92■□□□□ 0.3
TARDBP-203ENST00000439080 LRRC14Q15048 493 aa16.92■□□□□ 0.3
TARDBP-203ENST00000439080 KCTD19Q17RG1 926 aaPredicted RBP16.92■□□□□ 0.3
TARDBP-203ENST00000439080 AASDHQ4L235 1098 aaPredicted RBP16.92■□□□□ 0.3
TARDBP-203ENST00000439080 KCTD11Q693B1 232 aa16.92■□□□□ 0.3
TARDBP-203ENST00000439080 CCDC137Q6PK04 289 aaKnown RBP16.92■□□□□ 0.3
TARDBP-203ENST00000439080 KDM7AQ6ZMT4 941 aa16.92■□□□□ 0.3
TARDBP-203ENST00000439080 LYSMD3Q7Z3D4 306 aa16.92■□□□□ 0.3
TARDBP-203ENST00000439080 ABI3BPQ7Z7G0 1075 aa16.92■□□□□ 0.3
TARDBP-203ENST00000439080 GPR161Q8N6U8 529 aaKnown RBP16.92■□□□□ 0.3
TARDBP-203ENST00000439080 MFSD2AQ8NA29 543 aa16.92■□□□□ 0.3
TARDBP-203ENST00000439080 CENPTQ96BT3 561 aa16.92■□□□□ 0.3
TARDBP-203ENST00000439080 NUS1Q96E22 293 aa16.92■□□□□ 0.3
TARDBP-203ENST00000439080 DTD2Q96FN9 168 aa16.92■□□□□ 0.3
TARDBP-203ENST00000439080 TBL1YQ9BQ87 522 aa16.92■□□□□ 0.3
TARDBP-203ENST00000439080 APOL2Q9BQE5 337 aa16.92■□□□□ 0.3
TARDBP-203ENST00000439080 EDEM2Q9BV94 578 aa16.92■□□□□ 0.3
TARDBP-203ENST00000439080 RXFP3Q9NSD7 469 aa16.92■□□□□ 0.3
TARDBP-203ENST00000439080 SPO11Q9Y5K1 396 aa16.92■□□□□ 0.3
TARDBP-203ENST00000439080 POM121BA6NF01 834 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 FOXD2O60548 495 aaPredicted RBP16.91■□□□□ 0.3
TARDBP-203ENST00000439080 USP12O75317 370 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 CLDN7O95471 211 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 AGTP01019 485 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 PCCBP05166 539 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 SYPP08247 313 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 RPL22P35268 128 aaKnown RBP16.91■□□□□ 0.3
TARDBP-203ENST00000439080 FDFT1P37268 417 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 FNTAP49354 379 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 STC1P52823 247 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 BNC1Q01954 994 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 PTSQ03393 145 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 SPARCL1Q14515 664 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 CDKN3Q16667 212 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 WSCD2Q2TBF2 565 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 IQCHQ86VS3 1027 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 KIAA2013Q8IYS2 634 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 PDCD7Q8N8D1 485 aaKnown RBP16.91■□□□□ 0.3
TARDBP-203ENST00000439080 OR13H1Q8NG92 308 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 ATL2Q8NHH9 583 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 LRRC45Q96CN5 670 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 LRRC40Q9H9A6 602 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 MAGEE1Q9HCI5 957 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 MBNL1Q9NR56 388 aaKnown RBP16.91■□□□□ 0.3
TARDBP-203ENST00000439080 RAB6BQ9NRW1 208 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 SHOC2Q9UQ13 582 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 ANKRD6Q9Y2G4 727 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 HS3ST3A1Q9Y663 406 aa16.91■□□□□ 0.3
TARDBP-203ENST00000439080 PDE2AO00408 941 aaPredicted RBP16.9■□□□□ 0.3
TARDBP-203ENST00000439080 ARHGAP33O14559 1287 aa16.9■□□□□ 0.3
TARDBP-203ENST00000439080 AP2A1O95782 977 aa16.9■□□□□ 0.3
TARDBP-203ENST00000439080 THEGLP0DJG4 465 aa16.9■□□□□ 0.3
TARDBP-203ENST00000439080 LMNB2Q03252 620 aa16.9■□□□□ 0.3
TARDBP-203ENST00000439080 OVGP1Q12889 678 aa16.9■□□□□ 0.3
TARDBP-203ENST00000439080 SEMA5AQ13591 1074 aa16.9■□□□□ 0.3
TARDBP-203ENST00000439080 KIF19Q2TAC6 998 aa16.9■□□□□ 0.3
TARDBP-203ENST00000439080 RANBP10Q6VN20 620 aa16.9■□□□□ 0.3
TARDBP-203ENST00000439080 SLC22A18ASQ8N1D0 253 aa16.9■□□□□ 0.3
TARDBP-203ENST00000439080 CBARPQ8N350 705 aaPredicted RBP16.9■□□□□ 0.3
TARDBP-203ENST00000439080 BLOC1S5Q8TDH9 187 aa16.9■□□□□ 0.3
TARDBP-203ENST00000439080 SKA1Q96BD8 255 aa16.9■□□□□ 0.3
TARDBP-203ENST00000439080 BMFQ96LC9 184 aa16.9■□□□□ 0.3
TARDBP-203ENST00000439080 GTPBP2Q9BX10 602 aaKnown RBP16.9■□□□□ 0.3
TARDBP-203ENST00000439080 ZDHHC5Q9C0B5 715 aa16.9■□□□□ 0.3
TARDBP-203ENST00000439080 DDX47Q9H0S4 455 aaKnown RBP16.9■□□□□ 0.3
TARDBP-203ENST00000439080 ZFYVE1Q9HBF4 777 aa16.9■□□□□ 0.3
TARDBP-203ENST00000439080 ETNK1Q9HBU6 452 aa16.9■□□□□ 0.3
TARDBP-203ENST00000439080 CD84Q9UIB8 345 aa16.9■□□□□ 0.3
TARDBP-203ENST00000439080 SNX11Q9Y5W9 270 aa16.9■□□□□ 0.3
TARDBP-203ENST00000439080 E7EVH7 732 aa16.89■□□□□ 0.3
TARDBP-203ENST00000439080 TLR4O00206 839 aa16.89■□□□□ 0.3
TARDBP-203ENST00000439080 PAFAH1B1P43034 410 aa16.89■□□□□ 0.3
TARDBP-203ENST00000439080 CTSKP43235 329 aa16.89■□□□□ 0.3
TARDBP-203ENST00000439080 RABIFP47224 123 aa16.89■□□□□ 0.3
TARDBP-203ENST00000439080 LMAN1P49257 510 aa16.89■□□□□ 0.3
TARDBP-203ENST00000439080 ATXN3P54252 364 aaPredicted RBP16.89■□□□□ 0.3
TARDBP-203ENST00000439080 NXPH1P58417 271 aa16.89■□□□□ 0.3
TARDBP-203ENST00000439080 TRIP13Q15645 432 aaPredicted RBP16.89■□□□□ 0.3
TARDBP-203ENST00000439080 ESRP1Q6NXG1 681 aaKnown RBP16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms