RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 SPDL1Q96EA4 605 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 TSPAN17Q96FV3 270 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 MED30Q96HR3 178 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 OSBPL9Q96SU4 736 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 C1QTNF1Q9BXJ1 281 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 IFIH1Q9BYX4 1025 aaKnown RBP5.58□□□□□ -1.52
RFC3-202ENST00000434425 DCLK3Q9C098 648 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 EXO5Q9H790 373 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 COQ10BQ9H8M1 238 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 KIF9Q9HAQ2 790 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 RAVER2Q9HCJ3 691 aaKnown RBP5.58□□□□□ -1.52
RFC3-202ENST00000434425 FBRSL1Q9HCM7 1045 aaKnown RBP5.58□□□□□ -1.52
RFC3-202ENST00000434425 TUFT1Q9NNX1 390 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 SAYSD1Q9NPB0 183 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 CENPMQ9NSP4 180 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 TAB2Q9NYJ8 693 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 TUBE1Q9UJT0 475 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 PCDHB10Q9UN67 800 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 HPSEQ9Y251 543 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 MTCH2Q9Y6C9 303 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 ASTN1O14525 1302 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 DMDP11532 3685 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 A0A0A0MRY4 1105 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 A0A1W2PN81 502 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 C5orf51A6NDU8 294 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 EPOPA6NHQ4 379 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 OR6C75A6NL08 312 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 AQP12BA6NM10 295 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 IQCF5A8MTL0 148 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 DYNC1LI2O43237 492 aaPredicted RBP5.58□□□□□ -1.52
RFC3-202ENST00000434425 RNF8O76064 485 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 MYO1DO94832 1006 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 PCDH8O95206 1070 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 CCNDBP1O95273 360 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 NDUFB10O96000 172 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 CSTAP01040 98 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 HMGN1P05114 100 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 ITGAVP06756 1048 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 ITGA5P08648 1049 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 FAM86B2P0C5J1 330 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 NCF1P14598 390 aaPredicted RBP5.58□□□□□ -1.52
RFC3-202ENST00000434425 CPB1P15086 417 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 TKTP29401 623 aaKnown RBP5.58□□□□□ -1.52
RFC3-202ENST00000434425 GBP1P32455 592 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 GCKP35557 465 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 CHRNA7P36544 502 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 CAPGP40121 348 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 SLC11A1P49279 550 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 SERPINB8P50452 374 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 ZNF143P52747 638 aaPredicted RBP5.58□□□□□ -1.52
RFC3-202ENST00000434425 MLLT6P55198 1093 aaPredicted RBP5.58□□□□□ -1.52
RFC3-202ENST00000434425 PRAMEP78395 509 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 FAM189BP81408 668 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 CTBSQ01459 385 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 LCP2Q13094 533 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 CBFBQ13951 182 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 TTLL4Q14679 1199 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 NTRK3Q16288 839 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 BAK1Q16611 211 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 PGS1Q32NB8 556 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 NHSL2Q5HYW2 709 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 SAPCD1Q5SSQ6 148 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 PRAMEF14Q5SWL7 426 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 THEM4Q5T1C6 240 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 PRAMEF20Q5VT98 475 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 RRAGBQ5VZM2 374 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 AFMIDQ63HM1 303 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 ANKRD40Q6AI12 368 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 SIGIRRQ6IA17 410 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 RCSD1Q6JBY9 416 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 CASC4Q6P4E1 433 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 CYB5D1Q6P9G0 228 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 H1FNTQ75WM6 255 aaPredicted RBP5.58□□□□□ -1.52
RFC3-202ENST00000434425 CHST3Q7LGC8 479 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 LRRC8AQ8IWT6 810 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 ATAD1Q8NBU5 361 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 TMIEQ8NEW7 156 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 SPATA4Q8NEY3 305 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 BBS1Q8NFJ9 593 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.58□□□□□ -1.522e-23■■■■■ 53.8
RFC3-202ENST00000434425 ATL1Q8WXF7 558 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 THRSPQ92748 146 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 MUL1Q969V5 352 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 RHBDF1Q96CC6 855 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 RNF125Q96EQ8 232 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 MAGEB10Q96LZ2 347 aaPredicted RBP5.58□□□□□ -1.52
RFC3-202ENST00000434425 NSUN5Q96P11 429 aaKnown RBP5.58□□□□□ -1.52
RFC3-202ENST00000434425 OR1F2PQ96R84 312 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 OSMRQ99650 979 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 SELENOSQ9BQE4 189 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 HEPHQ9BQS7 1158 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 HEMGNQ9BXL5 484 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 FTOQ9C0B1 505 aaKnown RBP eCLIP5.58□□□□□ -1.52
RFC3-202ENST00000434425 POLR1EQ9GZS1 481 aaKnown RBP5.58□□□□□ -1.52
RFC3-202ENST00000434425 CENPHQ9H3R5 247 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 PARVBQ9HBI1 364 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 SLC38A10Q9HBR0 1119 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 SLC35C2Q9NQQ7 365 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 PDGFCQ9NRA1 345 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 ZDHHC18Q9NUE0 388 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms