RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 COPS8Q99627 209 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 BRINP2Q9C0B6 783 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 NRDE2Q9H7Z3 1164 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 ST3GAL5Q9UNP4 418 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 SLC27A5Q9Y2P5 690 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 RIPK3Q9Y572 518 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 PEAK1Q9H792 1746 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 SCAMP3O14828 347 aaKnown RBP8.95□□□□□ -0.98
CTNND1-208ENST00000428599 DCLK1O15075 740 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 RIPK2O43353 540 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 TPD52L2O43399 206 aaKnown RBP8.95□□□□□ -0.98
CTNND1-208ENST00000428599 SNUPNO95149 360 aaKnown RBP8.95□□□□□ -0.98
CTNND1-208ENST00000428599 S100A9P06702 114 aaKnown RBP8.95□□□□□ -0.98
CTNND1-208ENST00000428599 ALADP13716 330 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 PSMD8P48556 350 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 SLC7A2P52569 658 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 MBTD1Q05BQ5 628 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 TBX2Q13207 712 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-208ENST00000428599 INAVAQ3KP66 663 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 FAM91A1Q658Y4 838 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 CAPN13Q6MZZ7 669 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-208ENST00000428599 GCNT7Q6ZNI0 430 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 GPRIN3Q6ZVF9 776 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 CHST15Q7LFX5 561 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-208ENST00000428599 CLVS1Q8IUQ0 354 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-208ENST00000428599 REM2Q8IYK8 340 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-208ENST00000428599 TMEM161BQ8NDZ6 487 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 PPTC7Q8NI37 304 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 ETNPPLQ8TBG4 499 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 CAPNS2Q96L46 248 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 TMPRSS4Q9NRS4 437 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 LMO7Q8WWI1 1683 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 A0A0X1KG70 313 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 FAM86C2PA6NEL3 165 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 CHADO15335 359 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 ZNF208O43345 1280 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 TNFRSF21O75509 655 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 IFNA6P05013 189 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 PSMB4P28070 264 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 SCTRP47872 440 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 ERVK-21P61565 698 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 GTF2BQ00403 316 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 ZNF155Q12901 538 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-208ENST00000428599 PPIGQ13427 754 aaKnown RBP eCLIP8.95□□□□□ -0.981e-7■□□□□ 10.9
CTNND1-208ENST00000428599 SF1Q15637 639 aaKnown RBP8.95□□□□□ -0.98
CTNND1-208ENST00000428599 SPRYD7Q5W111 196 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 FATE1Q969F0 183 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 SEMA3CQ99985 751 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 TMEM27Q9HBJ8 222 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.95□□□□□ -0.98
CTNND1-208ENST00000428599 ERVW-1Q9UQF0 538 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 MTF2Q9Y483 593 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-208ENST00000428599 A0A087WXM4 84 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 SIN3BO75182 1162 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 VARSP26640 1264 aaKnown RBP8.95□□□□□ -0.98
CTNND1-208ENST00000428599 CRYBB1P53674 252 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-208ENST00000428599 MANFP55145 182 aaKnown RBP8.95□□□□□ -0.98
CTNND1-208ENST00000428599 CASP9P55211 416 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 TARBP2Q15633 366 aaKnown RBP8.95□□□□□ -0.98
CTNND1-208ENST00000428599 PYDC2Q56P42 97 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 GPR180Q86V85 440 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 HIPK1Q86Z02 1210 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 NAT16Q8N8M0 369 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 CD99L2Q8TCZ2 262 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 ADAMTS15Q8TE58 950 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 HNRNPLLQ8WVV9 542 aaKnown RBP8.95□□□□□ -0.98
CTNND1-208ENST00000428599 SMG7Q92540 1137 aaKnown RBP8.95□□□□□ -0.98
CTNND1-208ENST00000428599 ACO2Q99798 780 aaKnown RBP8.95□□□□□ -0.98
CTNND1-208ENST00000428599 CDT1Q9H211 546 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 HIPK3Q9H422 1215 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 ZFP14Q9HCL3 533 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 CCDC162PA2VCL2 907 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 TRIM64A6NGJ6 449 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 WRBO00258 174 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 USP12O75317 370 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 GNSP15586 552 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 CTPS1P17812 591 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 ATXN1P54253 815 aaKnown RBP8.95□□□□□ -0.98
CTNND1-208ENST00000428599 ATP6V0D1P61421 351 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 CDK16Q00536 496 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 ITGB3BPQ13352 177 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-208ENST00000428599 PLA2G4EQ3MJ16 856 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 MAB21L3Q8N8X9 362 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 OR52K1Q8NGK4 314 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 MCRS1Q96EZ8 462 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 MYO19Q96H55 970 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 MCMBPQ9BTE3 642 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 LACRTQ9GZZ8 138 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 CHMP1AQ9HD42 196 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-208ENST00000428599 CFAP97Q9P2B7 532 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 PTCH2Q9Y6C5 1203 aa8.95□□□□□ -0.98
CTNND1-208ENST00000428599 TCF4P15884 667 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 PECAM1P16284 738 aaPredicted RBP8.94□□□□□ -0.98
CTNND1-208ENST00000428599 MNDAP41218 407 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 CCR3P51677 355 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 ACLYP53396 1101 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 TAS2R50P59544 299 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 PTPRNQ16849 979 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 DUSP28Q4G0W2 176 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 GALNT13Q8IUC8 556 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms