RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 ATP4BP51164 291 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 PLA2G16P53816 162 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 MYL6P60660 151 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 OGDHQ02218 1023 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 SP4Q02446 784 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 LAMC2Q13753 1193 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 GALNT3Q14435 633 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 CTF1Q16619 201 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 AMHR2Q16671 573 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 PGS1Q32NB8 556 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 ZACNQ401N2 412 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 TMEM240Q5SV17 173 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 SLC9A4Q6AI14 798 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 LLGL2Q6P1M3 1020 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 DCUN1D2Q6PH85 259 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 PADI6Q6TGC4 694 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 CLEC14AQ86T13 490 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 CBWD2Q8IUF1 395 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 PELI3Q8N2H9 469 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 TRPV3Q8NET8 790 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 USP13Q92995 863 aaPredicted RBP10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 WNT8BQ93098 351 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 SDCCAG3Q96C92 435 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 RIT2Q99578 217 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 SLC39A3Q9BRY0 314 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 C16orf70Q9BSU1 422 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 GON7Q9BXV9 100 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 LHPPQ9H008 270 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 FANCEQ9HB96 536 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 KLHL11Q9NVR0 708 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 ADA2Q9NZK5 511 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 TMEM216Q9P0N5 145 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 CXXC1Q9P0U4 656 aaPredicted RBP10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 RABL2AQ9UBK7 228 aaPredicted RBP10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 SLC9A2Q9UBY0 812 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 KLQ9UEF7 1012 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 PCDHGA3Q9Y5H0 932 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 MUC3AQ02505 3323 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 PTPRSQ13332 1948 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 TTC24A2A3L6 582 aaPredicted RBP10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 E7ENX8 843 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 TPP1O14773 563 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 MTSS1O43312 755 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 MAN1A2O60476 641 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 CCDC159P0C7I6 412 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 HSD17B1P14061 328 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 TCN1P20061 433 aaPredicted RBP10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 TGM2P21980 687 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 ACVR2AP27037 513 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 ICAM3P32942 547 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 HADHAP40939 763 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 EIF2DP41214 584 aaKnown RBP10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 RAD51Q06609 339 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 EPS8Q12929 822 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 BFSP2Q13515 415 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 CUL2Q13617 745 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 ACOX1Q15067 660 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 NEDD8Q15843 81 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 NXNQ6DKJ4 435 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 TXNRD3NBQ6F5E7 133 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 SYCE2Q6PIF2 218 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 TMC5Q6UXY8 1006 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 SVOPQ8N4V2 548 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 DEFB123Q8N688 67 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 KIAA1958Q8N8K9 716 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 TMEM35BQ8NCS4 154 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 SPATA18Q8TC71 538 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 MYRFLQ96LU7 910 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 NTPCRQ9BSD7 190 aaKnown RBP10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 MTMR12Q9C0I1 747 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 HPS4Q9NQG7 708 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 RAB6BQ9NRW1 208 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 TBC1D13Q9NVG8 400 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 INTS10Q9NVR2 710 aaKnown RBP10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 OXSMQ9NWU1 459 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 CACNA2D2Q9NY47 1150 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 RBAKQ9NYW8 714 aaPredicted RBP10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 ANAPC2Q9UJX6 822 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 FBXO9Q9UK97 447 aaPredicted RBP10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 PACSIN3Q9UKS6 424 aa10.65□□□□□ -0.7
NIF3L1-204ENST00000409357 ARID2Q68CP9 1835 aa10.65□□□□□ -0.71
NIF3L1-204ENST00000409357 MAGEB16A2A368 324 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 PRORSD1PA6NEY8 169 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 BBIP1A8MTZ0 92 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 GRXCR1A8MXD5 290 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 HAS3O00219 553 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 GAS2O43903 313 aaKnown RBP10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 KPNA6O60684 536 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 MRPS14O60783 128 aaKnown RBP10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 GPC4O75487 556 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 GABBR2O75899 941 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 SUPT7LO94864 414 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 NDST3O95803 873 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 CCNE2O96020 404 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 TGFB3P10600 412 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 BMP4P12644 408 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 TFEBP19484 476 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 POLR2IP36954 125 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms