RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 FBF1Q8TES7 1133 aa16.97■□□□□ 0.31
TSPAN4-205ENST00000397406 SCRN2Q96FV2 425 aa16.97■□□□□ 0.31
TSPAN4-205ENST00000397406 MCCC1Q96RQ3 725 aaPredicted RBP16.97■□□□□ 0.31
TSPAN4-205ENST00000397406 LYSMD1Q96S90 227 aa16.97■□□□□ 0.31
TSPAN4-205ENST00000397406 FAM126AQ9BYI3 521 aaPredicted RBP16.97■□□□□ 0.31
TSPAN4-205ENST00000397406 CD248Q9HCU0 757 aa16.97■□□□□ 0.31
TSPAN4-205ENST00000397406 MOCS1Q9NZB8 636 aa16.97■□□□□ 0.31
TSPAN4-205ENST00000397406 SLC2A6Q9UGQ3 507 aa16.97■□□□□ 0.31
TSPAN4-205ENST00000397406 RIMKLBQ9ULI2 386 aa16.97■□□□□ 0.31
TSPAN4-205ENST00000397406 ZNF711Q9Y462 761 aa16.97■□□□□ 0.31
TSPAN4-205ENST00000397406 ARL5AQ9Y689 179 aa16.97■□□□□ 0.31
TSPAN4-205ENST00000397406 LRRK1Q38SD2 2015 aa16.97■□□□□ 0.31
TSPAN4-205ENST00000397406 CCDC78A2IDD5 438 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 C16orf96A6NNT2 1141 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 ALDH1A2O94788 518 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 TIMP2P16035 220 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 PSMA3P25788 255 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 ITGB7P26010 798 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 STX2P32856 288 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 HNF1BP35680 557 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 ZNF140P52738 457 aaPredicted RBP16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 METAP1P53582 386 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 POLR2LP62875 67 aaKnown RBP16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 LAMB3Q13751 1172 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 LPAL2Q16609 132 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 UGP2Q16851 508 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 SDE2Q6IQ49 451 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 KIAA1211LQ6NV74 962 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 ESRP1Q6NXG1 681 aaKnown RBP16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 TRMT10BQ6PF06 316 aaKnown RBP16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 LRIG3Q6UXM1 1119 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 PARS2Q7L3T8 475 aaKnown RBP16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 NLRP9Q7RTR0 991 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 DSG4Q86SJ6 1040 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 MMAAQ8IVH4 418 aaKnown RBP16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 UNC5BQ8IZJ1 945 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 SYNPOQ8N3V7 929 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 PAF1Q8N7H5 531 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 TXNDC5Q8NBS9 432 aaKnown RBP16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 PEX13Q92968 403 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 ARRDC3Q96B67 414 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 ERLEC1Q96DZ1 483 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 RSPH9Q9H1X1 276 aaPredicted RBP16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 TRABDQ9H4I3 376 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 ACSS3Q9H6R3 686 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 PARD6AQ9NPB6 346 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 KCTD3Q9Y597 815 aa16.96■□□□□ 0.31
TSPAN4-205ENST00000397406 A0A0U1RQS6 177 aa16.96■□□□□ 0.3
TSPAN4-205ENST00000397406 A0A1W2PQF6 199 aa16.96■□□□□ 0.3
TSPAN4-205ENST00000397406 NPIPB15A6NHN6 443 aaPredicted RBP16.96■□□□□ 0.3
TSPAN4-205ENST00000397406 UPK3BL1B0FP48 263 aa16.96■□□□□ 0.3
TSPAN4-205ENST00000397406 UPK3BL2E5RIL1 263 aa16.96■□□□□ 0.3
TSPAN4-205ENST00000397406 KPNA3O00505 521 aaPredicted RBP16.96■□□□□ 0.3
TSPAN4-205ENST00000397406 SYNCRIPO60506 623 aaKnown RBP16.96■□□□□ 0.3
TSPAN4-205ENST00000397406 CRTAMO95727 393 aa16.96■□□□□ 0.3
TSPAN4-205ENST00000397406 PXNP49023 591 aaPredicted RBP16.96■□□□□ 0.3
TSPAN4-205ENST00000397406 COPAP53621 1224 aa16.96■□□□□ 0.3
TSPAN4-205ENST00000397406 ACVR1Q04771 509 aa16.96■□□□□ 0.3
TSPAN4-205ENST00000397406 CNGA3Q16281 694 aa16.96■□□□□ 0.3
TSPAN4-205ENST00000397406 POM121L1PQ3SYA9 428 aa16.96■□□□□ 0.3
TSPAN4-205ENST00000397406 HSF5Q4G112 596 aaPredicted RBP16.96■□□□□ 0.3
TSPAN4-205ENST00000397406 USP45Q70EL2 814 aa16.96■□□□□ 0.3
TSPAN4-205ENST00000397406 NDUFAF2Q8N183 169 aa16.96■□□□□ 0.3
TSPAN4-205ENST00000397406 OR13J1Q8NGT2 312 aa16.96■□□□□ 0.3
TSPAN4-205ENST00000397406 RPLP0P6Q8NHW5 317 aa16.96■□□□□ 0.3
TSPAN4-205ENST00000397406 STYXQ8WUJ0 223 aa16.96■□□□□ 0.3
TSPAN4-205ENST00000397406 EID2BQ96D98 161 aa16.96■□□□□ 0.3
TSPAN4-205ENST00000397406 SRPK1Q96SB4 655 aaKnown RBP16.96■□□□□ 0.3
TSPAN4-205ENST00000397406 SPTBN4Q9H254 2564 aa16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 BPTFQ12830 3046 aa16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 C1QTNF3-AMACRE9PGA6 284 aa16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 AGPSO00116 658 aa16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 BUD23O43709 281 aaKnown RBP16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 IL1BP01584 269 aa16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 HOXB2P14652 356 aa16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 ARNTP27540 789 aa16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 HOXA6P31267 233 aa16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 ARCN1P48444 511 aaKnown RBP16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 PSMD8P48556 350 aa16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 EIF3BP55884 814 aaKnown RBP16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 ZNF844Q08AG5 666 aa16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 PTPRCAPQ14761 206 aa16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 STAT4Q14765 748 aa16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 EFTUD2Q15029 972 aaKnown RBP eCLIP16.95■□□□□ 0.32e-6■■■□□ 18.4
TSPAN4-205ENST00000397406 KBTBD12Q3ZCT8 623 aa16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 LRRC73Q5JTD7 316 aa16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 KIAA0930Q6ICG6 404 aaPredicted RBP16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 ZNF449Q6P9G9 518 aa16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 LYSMD3Q7Z3D4 306 aa16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 OR13C4Q8NGS5 318 aa16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 OR2T3Q8NH03 318 aa16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 CERS2Q96G23 380 aa16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 TMEM109Q9BVC6 243 aa16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 FBRSQ9HAH7 460 aa16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 SMYD2Q9NRG4 433 aa16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 IL1RAPL1Q9NZN1 696 aa16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 MMP17Q9ULZ9 603 aa16.95■□□□□ 0.3
TSPAN4-205ENST00000397406 FAM159BA6NKW6 160 aa16.94■□□□□ 0.3
TSPAN4-205ENST00000397406 C2orf81A6NN90 581 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms