RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 CRIM1Q9NZV1 1036 aa11.5□□□□□ -0.57
RTN1-203ENST00000395090 LHX3Q9UBR4 397 aa11.5□□□□□ -0.57
RTN1-203ENST00000395090 PLAAQ9Y263 795 aa11.5□□□□□ -0.57
RTN1-203ENST00000395090 POLR3KQ9Y2Y1 108 aaPredicted RBP11.5□□□□□ -0.57
RTN1-203ENST00000395090 USP15Q9Y4E8 981 aaPredicted RBP11.5□□□□□ -0.57
RTN1-203ENST00000395090 TTLL3Q9Y4R7 772 aa11.5□□□□□ -0.57
RTN1-203ENST00000395090 SZT2Q5T011 3432 aa11.5□□□□□ -0.57
RTN1-203ENST00000395090 MAGEB16A2A368 324 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 K7ERQ8 282 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 SMAD6O43541 496 aaKnown RBP11.49□□□□□ -0.57
RTN1-203ENST00000395090 USP12O75317 370 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 PMPCBO75439 489 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 ZNF821O75541 412 aaPredicted RBP11.49□□□□□ -0.57
RTN1-203ENST00000395090 TCEA3O75764 348 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 AGTP01019 485 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 CD86P42081 329 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 RGRP47804 291 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 CSNK1DP48730 415 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 GPX6P59796 221 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 CDH17Q12864 832 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 OLIG2Q13516 323 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 TMEM215Q68D42 235 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 DENND2CQ68D51 928 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 C3orf62Q6ZUJ4 267 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 CYS1Q717R9 158 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 MTSS1LQ765P7 747 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 AHI1Q8N157 1196 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.49□□□□□ -0.57
RTN1-203ENST00000395090 NAT16Q8N8M0 369 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 OR52K1Q8NGK4 314 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 PKNOX2Q96KN3 472 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 NSMCE3Q96MG7 304 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 TBL1YQ9BQ87 522 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 NAT9Q9BTE0 207 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 PLAC1Q9HBJ0 212 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 DENND4AQ7Z401 1863 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 KIF26AQ9ULI4 1882 aaPredicted RBP11.49□□□□□ -0.57
RTN1-203ENST00000395090 PRAMEF27A3QJZ7 478 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 ARNTLO00327 626 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 INSIG1O15503 277 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 TULP3O75386 442 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 GJB3O75712 270 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 ALX3O95076 343 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 TIAF1O95411 115 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 ACSL3O95573 720 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 SERPINF2P08697 491 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 GSTA2P09210 222 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 DRD2P14416 443 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 ECT2LQ008S8 904 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 MSLNQ13421 630 aaPredicted RBP11.49□□□□□ -0.57
RTN1-203ENST00000395090 MTM1Q13496 603 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 RUNX3Q13761 415 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 GK5Q6ZS86 529 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 PALM2Q8IXS6 379 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 SH2D3CQ8N5H7 860 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 ATP11CQ8NB49 1132 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 ST13P5Q8NFI4 369 aaPredicted RBP11.49□□□□□ -0.57
RTN1-203ENST00000395090 IPMKQ8NFU5 416 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 SH3GL2Q99962 352 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 RPP25Q9BUL9 199 aaKnown RBP11.49□□□□□ -0.57
RTN1-203ENST00000395090 BFARQ9NZS9 450 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 PPT2Q9UMR5 302 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 HIF3AQ9Y2N7 669 aa11.49□□□□□ -0.57
RTN1-203ENST00000395090 A0A087WUV0 522 aaPredicted RBP11.48□□□□□ -0.57
RTN1-203ENST00000395090 H3BQ06 376 aaPredicted RBP11.48□□□□□ -0.57
RTN1-203ENST00000395090 TRIM24O15164 1050 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 TIMM44O43615 452 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 SPAG6O75602 509 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 SHBGP04278 402 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 SRCP12931 536 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 MGAT1P26572 445 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 SSTR1P30872 391 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 SCNN1BP51168 640 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 SESN2P58004 480 aaPredicted RBP11.48□□□□□ -0.57
RTN1-203ENST00000395090 ZNF844Q08AG5 666 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 HTR4Q13639 388 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 SLC1A5Q15758 541 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 GEN1Q17RS7 908 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 DGKKQ5KSL6 1271 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 STEAP4Q687X5 459 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 MBLAC2Q68D91 279 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 NCEH1Q6PIU2 408 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 SRLQ86TD4 932 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 TMEM135Q86UB9 458 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 YAF2Q8IY57 180 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 MPP5Q8N3R9 675 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 CPA6Q8N4T0 437 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 DNAAF3Q8N9W5 541 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 OR2W6PQ8NHA6 318 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 WFIKKN2Q8TEU8 576 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 STAMBPL1Q96FJ0 436 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 FEM1CQ96JP0 617 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 FERD3LQ96RJ6 166 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 TRIB3Q96RU7 358 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 CDX2Q99626 313 aaPredicted RBP11.48□□□□□ -0.57
RTN1-203ENST00000395090 KXD1Q9BQD3 176 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 APOL2Q9BQE5 337 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 FICDQ9BVA6 458 aa11.48□□□□□ -0.57
RTN1-203ENST00000395090 TRMT61BQ9BVS5 477 aaKnown RBP11.48□□□□□ -0.57
RTN1-203ENST00000395090 FSD1LQ9BXM9 530 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms