RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 C1SP09871 688 aa17.03■□□□□ 0.32
RER1-202ENST00000378512 CYP2A6P11509 494 aaPredicted RBP17.03■□□□□ 0.32
RER1-202ENST00000378512 JUPP14923 745 aa17.03■□□□□ 0.32
RER1-202ENST00000378512 PECAM1P16284 738 aaPredicted RBP17.03■□□□□ 0.32
RER1-202ENST00000378512 PTPN7P35236 360 aa17.03■□□□□ 0.32
RER1-202ENST00000378512 THOP1P52888 689 aa17.03■□□□□ 0.32
RER1-202ENST00000378512 SKOR1P84550 965 aa17.03■□□□□ 0.32
RER1-202ENST00000378512 ITKQ08881 620 aa17.03■□□□□ 0.32
RER1-202ENST00000378512 TARDBPQ13148 414 aaKnown RBP eCLIP17.03■□□□□ 0.329e-7■■■■□ 21
RER1-202ENST00000378512 RAVER1Q8IY67 606 aaKnown RBP17.03■□□□□ 0.32
RER1-202ENST00000378512 PDCD7Q8N8D1 485 aaKnown RBP17.03■□□□□ 0.32
RER1-202ENST00000378512 FAM181AQ8N9Y4 354 aa17.03■□□□□ 0.32
RER1-202ENST00000378512 PLA2G15Q8NCC3 412 aa17.03■□□□□ 0.32
RER1-202ENST00000378512 ZNF548Q8NEK5 533 aaPredicted RBP17.03■□□□□ 0.32
RER1-202ENST00000378512 KIAA1524Q8TCG1 905 aa17.03■□□□□ 0.32
RER1-202ENST00000378512 BTN2A2Q8WVV5 523 aa17.03■□□□□ 0.32
RER1-202ENST00000378512 NLGN3Q9NZ94 848 aa17.03■□□□□ 0.32
RER1-202ENST00000378512 SAE1Q9UBE0 346 aaPredicted RBP17.03■□□□□ 0.32
RER1-202ENST00000378512 DKK4Q9UBT3 224 aa17.03■□□□□ 0.32
RER1-202ENST00000378512 ACACAQ13085 2346 aa17.02■□□□□ 0.32
RER1-202ENST00000378512 CCDC66A2RUB6 948 aa17.02■□□□□ 0.31
RER1-202ENST00000378512 CKMT2P17540 419 aa17.02■□□□□ 0.31
RER1-202ENST00000378512 ACP1P24666 158 aa17.02■□□□□ 0.31
RER1-202ENST00000378512 DYNLT1P63172 113 aa17.02■□□□□ 0.31
RER1-202ENST00000378512 AP1B1Q10567 949 aa17.02■□□□□ 0.31
RER1-202ENST00000378512 NFATC4Q14934 902 aa17.02■□□□□ 0.31
RER1-202ENST00000378512 PTPRRQ15256 657 aa17.02■□□□□ 0.31
RER1-202ENST00000378512 TEX44Q53QW1 395 aa17.02■□□□□ 0.31
RER1-202ENST00000378512 BBS12Q6ZW61 710 aa17.02■□□□□ 0.31
RER1-202ENST00000378512 USP45Q70EL2 814 aa17.02■□□□□ 0.31
RER1-202ENST00000378512 TECPR1Q7Z6L1 1165 aa17.02■□□□□ 0.31
RER1-202ENST00000378512 TSPAN33Q86UF1 283 aa17.02■□□□□ 0.31
RER1-202ENST00000378512 PDZD3Q86UT5 571 aa17.02■□□□□ 0.31
RER1-202ENST00000378512 NT5DC3Q86UY8 548 aa17.02■□□□□ 0.31
RER1-202ENST00000378512 PELI3Q8N2H9 469 aa17.02■□□□□ 0.31
RER1-202ENST00000378512 DTD2Q96FN9 168 aa17.02■□□□□ 0.31
RER1-202ENST00000378512 IMP4Q96G21 291 aaKnown RBP17.02■□□□□ 0.31
RER1-202ENST00000378512 SCN8AQ9UQD0 1980 aa17.02■□□□□ 0.31
RER1-202ENST00000378512 MYLKQ15746 1914 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 A0A0U1RQJ8 604 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 NEMP2A6NFY4 417 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 A8MX80 341 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 H3BM21 787 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 TPP1O14773 563 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 ALPIP09923 528 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 CDK4P11802 303 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 ZNF30P17039 623 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 JUNDP17535 347 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 CA4P22748 312 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 TEAD1P28347 426 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 HNF1BP35680 557 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 GSDMDP57764 484 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 KIAA1024LP59773 190 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 DPTQ07507 201 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 ILKQ13418 452 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 CDKN3Q16667 212 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 PNCKQ6P2M8 343 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 CRTC1Q6UUV9 634 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 HSD11B1LQ7Z5J1 315 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 NLRP8Q86W28 1048 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 NDUFAF2Q8N183 169 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 FUBP1Q96AE4 644 aaKnown RBP17.01■□□□□ 0.31
RER1-202ENST00000378512 TEKT5Q96M29 485 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 TRIB3Q96RU7 358 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 HERPUD2Q9BSE4 406 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 DUSP23Q9BVJ7 150 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 SLC25A51Q9H1U9 297 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 PCDH9Q9HC56 1237 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 CHKBQ9Y259 395 aa17.01■□□□□ 0.31
RER1-202ENST00000378512 COL27A1Q8IZC6 1860 aaPredicted RBP17.01■□□□□ 0.31
RER1-202ENST00000378512 SMG1Q96Q15 3661 aaKnown RBP17■□□□□ 0.31
RER1-202ENST00000378512 IGSF10Q6WRI0 2623 aa17■□□□□ 0.31
RER1-202ENST00000378512 LY6G6EA0A0G2JKS1 128 aa17■□□□□ 0.31
RER1-202ENST00000378512 CAPN8A6NHC0 703 aa17■□□□□ 0.31
RER1-202ENST00000378512 APOC4-APOC2K7ER74 178 aa17■□□□□ 0.31
RER1-202ENST00000378512 AQP9O43315 295 aa17■□□□□ 0.31
RER1-202ENST00000378512 NEBLO76041 1014 aa17■□□□□ 0.31
RER1-202ENST00000378512 APOC2P02655 101 aa17■□□□□ 0.31
RER1-202ENST00000378512 CTPS1P17812 591 aa17■□□□□ 0.31
RER1-202ENST00000378512 PTPN3P26045 913 aa17■□□□□ 0.31
RER1-202ENST00000378512 CD86P42081 329 aa17■□□□□ 0.31
RER1-202ENST00000378512 INSM1Q01101 510 aaPredicted RBP17■□□□□ 0.31
RER1-202ENST00000378512 PTSQ03393 145 aa17■□□□□ 0.31
RER1-202ENST00000378512 WASHC5Q12768 1159 aa17■□□□□ 0.31
RER1-202ENST00000378512 COL9A2Q14055 689 aaPredicted RBP17■□□□□ 0.31
RER1-202ENST00000378512 ACOX1Q15067 660 aa17■□□□□ 0.31
RER1-202ENST00000378512 KAZNQ674X7 775 aa17■□□□□ 0.31
RER1-202ENST00000378512 KIAA1328Q86T90 577 aa17■□□□□ 0.31
RER1-202ENST00000378512 PHACTR4Q8IZ21 702 aa17■□□□□ 0.31
RER1-202ENST00000378512 RBFAQ8N0V3 343 aa17■□□□□ 0.31
RER1-202ENST00000378512 TXLNBQ8N3L3 684 aa17■□□□□ 0.31
RER1-202ENST00000378512 PAF1Q8N7H5 531 aa17■□□□□ 0.31
RER1-202ENST00000378512 TFB1MQ8WVM0 346 aaKnown RBP17■□□□□ 0.31
RER1-202ENST00000378512 ALG3Q92685 438 aa17■□□□□ 0.31
RER1-202ENST00000378512 P3H4Q92791 437 aa17■□□□□ 0.31
RER1-202ENST00000378512 NUS1Q96E22 293 aa17■□□□□ 0.31
RER1-202ENST00000378512 DCBLD2Q96PD2 775 aa17■□□□□ 0.31
RER1-202ENST00000378512 SMIM14Q96QK8 99 aa17■□□□□ 0.31
RER1-202ENST00000378512 DESI2Q9BSY9 194 aa17■□□□□ 0.31
RER1-202ENST00000378512 LRRC61Q9BV99 259 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms