RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 CUL3Q13618 768 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 NAA25Q14CX7 972 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 RALGPS1Q5JS13 557 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 HECTD2Q5U5R9 776 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 TRIM68Q6AZZ1 485 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 TRIM67Q6ZTA4 783 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 LMNTD2Q8IXW0 634 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 PNPLA1Q8N8W4 532 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 PDZD8Q8NEN9 1154 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 HLA-CQ95604 372 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 CCDC126Q96EE4 140 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 NAF1Q96HR8 494 aaKnown RBP12.12□□□□□ -0.47
HMGCL-202ENST00000374487 FEM1CQ96JP0 617 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 ZNF599Q96NL3 588 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 PANX3Q96QZ0 392 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 TTLL2Q9BWV7 592 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 MAGEH1Q9H213 219 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 IGSF5Q9NSI5 407 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 CLEC1BQ9P126 229 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.12□□□□□ -0.47
HMGCL-202ENST00000374487 G3BP2Q9UN86 482 aaKnown RBP12.12□□□□□ -0.47
HMGCL-202ENST00000374487 CDYLQ9Y232 598 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 SSX2IPQ9Y2D8 614 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 KCTD3Q9Y597 815 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 ZFP37Q9Y6Q3 630 aaPredicted RBP12.12□□□□□ -0.47
HMGCL-202ENST00000374487 VWA8A3KMH1 1905 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 OR51F1A6NGY5 319 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 MUSKO15146 869 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 NVLO15381 856 aaKnown RBP12.12□□□□□ -0.47
HMGCL-202ENST00000374487 GRID2O43424 1007 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 BUD23O43709 281 aaKnown RBP12.12□□□□□ -0.47
HMGCL-202ENST00000374487 NPHS1O60500 1241 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 CLASP2O75122 1294 aaKnown RBP12.12□□□□□ -0.47
HMGCL-202ENST00000374487 SNUPNO95149 360 aaKnown RBP12.12□□□□□ -0.47
HMGCL-202ENST00000374487 EPOP01588 193 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 SOD2P04179 222 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 FGF1P05230 155 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 RBP1P09455 135 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 EPCAMP16422 314 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 PRDX6P30041 224 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 SLC6A4P31645 630 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 EPHB1P54762 984 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 ADAM15Q13444 863 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 GALNT3Q14435 633 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 PDCD2Q16342 344 aaPredicted RBP12.12□□□□□ -0.47
HMGCL-202ENST00000374487 TAF12Q16514 161 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 USP41Q3LFD5 358 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 LSM12Q3MHD2 195 aaKnown RBP12.12□□□□□ -0.47
HMGCL-202ENST00000374487 HECTD3Q5T447 861 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 SLC8B1Q6J4K2 584 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 FRMD7Q6ZUT3 714 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 GALNT7Q86SF2 657 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 DENND1CQ8IV53 801 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 LSMEM2Q8N112 164 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 C12orf76Q8N812 135 aaPredicted RBP12.12□□□□□ -0.47
HMGCL-202ENST00000374487 TXNDC5Q8NBS9 432 aaKnown RBP12.12□□□□□ -0.47
HMGCL-202ENST00000374487 TBATAQ96M53 351 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 NECAB3Q96P71 396 aaPredicted RBP12.12□□□□□ -0.47
HMGCL-202ENST00000374487 SUDS3Q9H7L9 328 aaPredicted RBP12.12□□□□□ -0.47
HMGCL-202ENST00000374487 CRYL1Q9Y2S2 319 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 ARL5AQ9Y689 179 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 NEMP2A6NFY4 417 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 ZMPSTE24O75844 475 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 S1PR4O95977 384 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 THRAP10827 490 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 CDH4P55283 916 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 DNAJB13P59910 316 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 AP2B1P63010 937 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 ACAP2Q15057 778 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 DUSP6Q16828 381 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 SH2D4BQ5SQS7 431 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 MRNIPQ6NTE8 343 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 LRRC74BQ6ZQY2 392 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 DEFB107AQ8IZN7 70 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 PPFIBP2Q8ND30 876 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 OR7D4Q8NG98 312 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 BRSK1Q8TDC3 778 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 DNAJC9Q8WXX5 260 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 CNDP1Q96KN2 507 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 LENG8Q96PV6 779 aaPredicted RBP12.11□□□□□ -0.47
HMGCL-202ENST00000374487 CINPQ9BW66 212 aaPredicted RBP12.11□□□□□ -0.47
HMGCL-202ENST00000374487 EML4Q9HC35 981 aaKnown RBP12.11□□□□□ -0.47
HMGCL-202ENST00000374487 CYP4F12Q9HCS2 524 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 GTSE1Q9NYZ3 720 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 MARCH4Q9P2E8 410 aaPredicted RBP12.11□□□□□ -0.47
HMGCL-202ENST00000374487 SEPT3Q9UH03 358 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 ANGPTL2Q9UKU9 493 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 BRWD1Q9NSI6 2320 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 CD3EAPO15446 510 aaKnown RBP12.11□□□□□ -0.47
HMGCL-202ENST00000374487 TEX28O15482 410 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 IPO13O94829 963 aaKnown RBP12.11□□□□□ -0.47
HMGCL-202ENST00000374487 LUC7L3O95232 432 aaKnown RBP12.11□□□□□ -0.47
HMGCL-202ENST00000374487 SLC4A1P02730 911 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 PIRTP0C851 137 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 HNRNPLP14866 589 aaKnown RBP eCLIP12.11□□□□□ -0.47
HMGCL-202ENST00000374487 GCKP35557 465 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 OXCT1P55809 520 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 RPS24P62847 133 aaKnown RBP12.11□□□□□ -0.47
HMGCL-202ENST00000374487 PEX6Q13608 980 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 TECRLQ5HYJ1 363 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms