RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 TPH1P17752 444 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 MYF6P23409 242 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 IGFBP5P24593 272 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 SNRPD2P62316 118 aaKnown RBP10.26□□□□□ -0.77
CD28-202ENST00000374481 NR6A1Q15406 480 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 SGO1Q5FBB7 561 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 PLA2G4FQ68DD2 849 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 LZTR1Q8N653 840 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 AFG1LQ8WV93 481 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 MYLPFQ96A32 169 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 ROPN1LQ96C74 230 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 CRAMP1Q96RY5 1269 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 C1QTNF1Q9BXJ1 281 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 DSN1Q9H410 356 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 CD274Q9NZQ7 290 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 PCDHGB4Q9UN71 923 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 INVSQ9Y283 1065 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 TRAF6Q9Y4K3 522 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 PRAMEF33A0A0G2JMD5 474 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 ATP6V1G2-DDX39BF2Z307 99 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 PRAMEF10O60809 474 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 CHRNGP07510 517 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 TSPAN8P19075 237 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 IVDP26440 423 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 CDKN2BP42772 138 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 ALDH3B2P48448 385 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 MEP1AQ16819 746 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 MSS51Q4VC12 460 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 AGAP6Q5VW22 663 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 ARSKQ6UWY0 536 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 NAT8LQ8N9F0 302 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 NKX2-3Q8TAU0 364 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 STON2Q8WXE9 905 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 DEDD2Q8WXF8 326 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 AGAP4Q96P64 663 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 SNX18Q96RF0 628 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 ACAD9Q9H845 621 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 ZMAT5Q9UDW3 170 aaKnown RBP10.26□□□□□ -0.77
CD28-202ENST00000374481 POLHQ9Y253 713 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 CFL2Q9Y281 166 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 RICTORQ6R327 1708 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 ZNF536O15090 1300 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 FADS2P1A8MWK0 482 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 NOBOXO60393 691 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 SNAP29O95721 258 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 MMP8P22894 467 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 CD40LGP29965 261 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 SFNP31947 248 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 GDF10P55107 478 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 BST2Q10589 180 aaKnown RBP10.25□□□□□ -0.77
CD28-202ENST00000374481 SWI5Q1ZZU3 235 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 AKIRIN2Q53H80 203 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 EPGNQ6UW88 154 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 PHF13Q86YI8 300 aaPredicted RBP10.25□□□□□ -0.77
CD28-202ENST00000374481 SLC9A9Q8IVB4 645 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 CHERPQ8IWX8 916 aaKnown RBP10.25□□□□□ -0.77
CD28-202ENST00000374481 SPARTQ8N0X7 666 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 ZNF597Q96LX8 424 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 CAMKK2Q96RR4 588 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 UCK2Q9BZX2 261 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 CUEDC1Q9NWM3 386 aaPredicted RBP10.25□□□□□ -0.77
CD28-202ENST00000374481 PAK1IP1Q9NWT1 392 aaPredicted RBP10.25□□□□□ -0.77
CD28-202ENST00000374481 SSR3Q9UNL2 185 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 EEF2KO00418 725 aaKnown RBP10.25□□□□□ -0.77
CD28-202ENST00000374481 PLK4O00444 970 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 SNX4O95219 450 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 CSF2P04141 144 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 LCP1P13796 627 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 FMO3P31513 532 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 GAD2Q05329 585 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 LRRC74AQ0VAA2 488 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 PLA2G4EQ3MJ16 856 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 ZNF568Q3ZCX4 644 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 C16orf86Q6ZW13 317 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 ANKLE1Q8NAG6 615 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 ZNF431Q8TF32 576 aaPredicted RBP10.25□□□□□ -0.77
CD28-202ENST00000374481 AP3S1Q92572 193 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 BRD7Q9NPI1 651 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 STARD7Q9NQZ5 370 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 KCNQ5Q9NR82 932 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 CISHQ9NSE2 258 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 GPSM3Q9Y4H4 160 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 FABP12A6NFH5 140 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 CXorf49A8MYA2 514 aaPredicted RBP10.25□□□□□ -0.77
CD28-202ENST00000374481 RAD17O75943 681 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 DNAJB5O75953 348 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 KLHL18O94889 574 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 INMTO95050 263 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 NR3C2P08235 984 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 MYL9P24844 172 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 RPL10P27635 214 aaKnown RBP10.25□□□□□ -0.77
CD28-202ENST00000374481 EMP3P54852 163 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 MAZP56270 477 aaKnown RBP10.25□□□□□ -0.77
CD28-202ENST00000374481 HSF2Q03933 536 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 OXA1LQ15070 435 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 PPP1R3AQ16821 1122 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 ERFEQ4G0M1 354 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 NOXA1Q86UR1 476 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 VAT1Q99536 393 aa10.25□□□□□ -0.77
CD28-202ENST00000374481 LHPPQ9H008 270 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms