RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 ALG11Q2TAA5 492 aa19.29■□□□□ 0.68
TRAPPC3-204ENST00000373166 ATXN7L2Q5T6C5 722 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC3-204ENST00000373166 ENPP7Q6UWV6 458 aa19.29■□□□□ 0.68
TRAPPC3-204ENST00000373166 RD3Q7Z3Z2 195 aa19.29■□□□□ 0.68
TRAPPC3-204ENST00000373166 VOPP1Q96AW1 172 aa19.29■□□□□ 0.68
TRAPPC3-204ENST00000373166 PACSIN1Q9BY11 444 aa19.29■□□□□ 0.68
TRAPPC3-204ENST00000373166 NHEJ1Q9H9Q4 299 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC3-204ENST00000373166 SP110Q9HB58 689 aa19.29■□□□□ 0.68
TRAPPC3-204ENST00000373166 COL12A1Q99715 3063 aa19.29■□□□□ 0.68
TRAPPC3-204ENST00000373166 DFFAO00273 331 aa19.28■□□□□ 0.68
TRAPPC3-204ENST00000373166 PRAMEF11O60813 436 aa19.28■□□□□ 0.68
TRAPPC3-204ENST00000373166 PAPOLAP51003 745 aaKnown RBP19.28■□□□□ 0.68
TRAPPC3-204ENST00000373166 SRSF1Q07955 248 aaKnown RBP eCLIP19.28■□□□□ 0.68
TRAPPC3-204ENST00000373166 TBX2Q13207 712 aaPredicted RBP19.28■□□□□ 0.68
TRAPPC3-204ENST00000373166 KRT81Q14533 505 aa19.28■□□□□ 0.68
TRAPPC3-204ENST00000373166 AFMIDQ63HM1 303 aa19.28■□□□□ 0.68
TRAPPC3-204ENST00000373166 TMCO3Q6UWJ1 677 aa19.28■□□□□ 0.68
TRAPPC3-204ENST00000373166 ZNF574Q6ZN55 896 aaPredicted RBP19.28■□□□□ 0.68
TRAPPC3-204ENST00000373166 CCNJLQ8IV13 435 aa19.28■□□□□ 0.68
TRAPPC3-204ENST00000373166 LZTR1Q8N653 840 aa19.28■□□□□ 0.68
TRAPPC3-204ENST00000373166 NPWQ8N729 165 aa19.28■□□□□ 0.68
TRAPPC3-204ENST00000373166 ATL2Q8NHH9 583 aa19.28■□□□□ 0.68
TRAPPC3-204ENST00000373166 CHP1Q99653 195 aa19.28■□□□□ 0.68
TRAPPC3-204ENST00000373166 SLC39A8Q9C0K1 460 aa19.28■□□□□ 0.68
TRAPPC3-204ENST00000373166 PDFQ9HBH1 243 aa19.28■□□□□ 0.68
TRAPPC3-204ENST00000373166 SPTLC3Q9NUV7 552 aa19.28■□□□□ 0.68
TRAPPC3-204ENST00000373166 DKK3Q9UBP4 350 aa19.28■□□□□ 0.68
TRAPPC3-204ENST00000373166 PCDHGA4Q9Y5G9 962 aa19.28■□□□□ 0.68
TRAPPC3-204ENST00000373166 RP1P56715 2156 aa19.27■□□□□ 0.68
TRAPPC3-204ENST00000373166 PROSCO94903 275 aa19.27■□□□□ 0.68
TRAPPC3-204ENST00000373166 TIMP2P16035 220 aa19.27■□□□□ 0.68
TRAPPC3-204ENST00000373166 ITIH2P19823 946 aa19.27■□□□□ 0.68
TRAPPC3-204ENST00000373166 XPAP23025 273 aaPredicted RBP19.27■□□□□ 0.68
TRAPPC3-204ENST00000373166 GJC1P36383 396 aa19.27■□□□□ 0.68
TRAPPC3-204ENST00000373166 SUOXP51687 545 aa19.27■□□□□ 0.68
TRAPPC3-204ENST00000373166 SRP54P61011 504 aaKnown RBP19.27■□□□□ 0.68
TRAPPC3-204ENST00000373166 ELP6Q0PNE2 266 aa19.27■□□□□ 0.68
TRAPPC3-204ENST00000373166 NFATC4Q14934 902 aa19.27■□□□□ 0.68
TRAPPC3-204ENST00000373166 TBR1Q16650 682 aa19.27■□□□□ 0.68
TRAPPC3-204ENST00000373166 WSCD2Q2TBF2 565 aa19.27■□□□□ 0.68
TRAPPC3-204ENST00000373166 COLEC12Q5KU26 742 aa19.27■□□□□ 0.68
TRAPPC3-204ENST00000373166 POLNQ7Z5Q5 900 aa19.27■□□□□ 0.68
TRAPPC3-204ENST00000373166 ARHGAP12Q8IWW6 846 aa19.27■□□□□ 0.68
TRAPPC3-204ENST00000373166 Q8N9G6 341 aaPredicted RBP19.27■□□□□ 0.68
TRAPPC3-204ENST00000373166 CSPG4P5Q96PW8 444 aa19.27■□□□□ 0.68
TRAPPC3-204ENST00000373166 CMKLR1Q99788 373 aa19.27■□□□□ 0.68
TRAPPC3-204ENST00000373166 RBSNQ9H1K0 784 aa19.27■□□□□ 0.68
TRAPPC3-204ENST00000373166 PCDH18Q9HCL0 1135 aa19.27■□□□□ 0.68
TRAPPC3-204ENST00000373166 APPL1Q9UKG1 709 aa19.27■□□□□ 0.68
TRAPPC3-204ENST00000373166 PRAMEF33A0A0G2JMD5 474 aa19.26■□□□□ 0.67
TRAPPC3-204ENST00000373166 J3KR12 359 aa19.26■□□□□ 0.67
TRAPPC3-204ENST00000373166 PRAMEF10O60809 474 aa19.26■□□□□ 0.67
TRAPPC3-204ENST00000373166 PPFIA2O75334 1257 aa19.26■□□□□ 0.67
TRAPPC3-204ENST00000373166 GLB1P16278 677 aa19.26■□□□□ 0.67
TRAPPC3-204ENST00000373166 ITIH1P19827 911 aa19.26■□□□□ 0.67
TRAPPC3-204ENST00000373166 CDH6P55285 790 aa19.26■□□□□ 0.67
TRAPPC3-204ENST00000373166 ZFP36L1Q07352 338 aaKnown RBP19.26■□□□□ 0.67
TRAPPC3-204ENST00000373166 INPP5AQ14642 412 aa19.26■□□□□ 0.67
TRAPPC3-204ENST00000373166 TMEM52BQ4KMG9 183 aa19.26■□□□□ 0.67
TRAPPC3-204ENST00000373166 TXNRD3NBQ6F5E7 133 aa19.26■□□□□ 0.67
TRAPPC3-204ENST00000373166 VASH2Q86V25 355 aa19.26■□□□□ 0.67
TRAPPC3-204ENST00000373166 GPR156Q8NFN8 814 aa19.26■□□□□ 0.67
TRAPPC3-204ENST00000373166 EXOC2Q96KP1 924 aa19.26■□□□□ 0.67
TRAPPC3-204ENST00000373166 APOOQ9BUR5 198 aa19.26■□□□□ 0.67
TRAPPC3-204ENST00000373166 RCOR3Q9P2K3 495 aaPredicted RBP19.26■□□□□ 0.67
TRAPPC3-204ENST00000373166 LHX3Q9UBR4 397 aa19.26■□□□□ 0.67
TRAPPC3-204ENST00000373166 KLQ9UEF7 1012 aa19.26■□□□□ 0.67
TRAPPC3-204ENST00000373166 MFHAS1Q9Y4C4 1052 aa19.26■□□□□ 0.67
TRAPPC3-204ENST00000373166 BSNQ9UPA5 3926 aa19.26■□□□□ 0.67
TRAPPC3-204ENST00000373166 TNFP01375 233 aa19.25■□□□□ 0.67
TRAPPC3-204ENST00000373166 PNLIPP16233 465 aa19.25■□□□□ 0.67
TRAPPC3-204ENST00000373166 AMPD1P23109 780 aa19.25■□□□□ 0.67
TRAPPC3-204ENST00000373166 MAN1A1P33908 653 aa19.25■□□□□ 0.67
TRAPPC3-204ENST00000373166 SERPINB6P35237 376 aa19.25■□□□□ 0.67
TRAPPC3-204ENST00000373166 CYTH1Q15438 398 aa19.25■□□□□ 0.67
TRAPPC3-204ENST00000373166 ZFAND4Q86XD8 727 aa19.25■□□□□ 0.67
TRAPPC3-204ENST00000373166 RHOT2Q8IXI1 618 aa19.25■□□□□ 0.67
TRAPPC3-204ENST00000373166 NETO2Q8NC67 525 aa19.25■□□□□ 0.67
TRAPPC3-204ENST00000373166 USP7Q93009 1102 aa19.25■□□□□ 0.67
TRAPPC3-204ENST00000373166 RBM15Q96T37 977 aaKnown RBP eCLIP19.25■□□□□ 0.67
TRAPPC3-204ENST00000373166 CINPQ9BW66 212 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC3-204ENST00000373166 COQ6Q9Y2Z9 468 aa19.25■□□□□ 0.67
TRAPPC3-204ENST00000373166 OR1A2Q9Y585 309 aa19.25■□□□□ 0.67
TRAPPC3-204ENST00000373166 KIF26BQ2KJY2 2108 aa19.25■□□□□ 0.67
TRAPPC3-204ENST00000373166 AGRPO00253 132 aa19.24■□□□□ 0.67
TRAPPC3-204ENST00000373166 PALMO75781 387 aa19.24■□□□□ 0.67
TRAPPC3-204ENST00000373166 KRT7P08729 469 aa19.24■□□□□ 0.67
TRAPPC3-204ENST00000373166 CD82P27701 267 aa19.24■□□□□ 0.67
TRAPPC3-204ENST00000373166 ZNF75DP51815 510 aa19.24■□□□□ 0.67
TRAPPC3-204ENST00000373166 MAPK10P53779 464 aa19.24■□□□□ 0.67
TRAPPC3-204ENST00000373166 IL10RBQ08334 325 aa19.24■□□□□ 0.67
TRAPPC3-204ENST00000373166 RFTN1Q14699 578 aaPredicted RBP19.24■□□□□ 0.67
TRAPPC3-204ENST00000373166 GRM3Q14832 879 aa19.24■□□□□ 0.67
TRAPPC3-204ENST00000373166 CERCAMQ5T4B2 595 aa19.24■□□□□ 0.67
TRAPPC3-204ENST00000373166 TMEM164Q5U3C3 297 aa19.24■□□□□ 0.67
TRAPPC3-204ENST00000373166 DTX1Q86Y01 620 aa19.24■□□□□ 0.67
TRAPPC3-204ENST00000373166 HCAR2Q8TDS4 363 aa19.24■□□□□ 0.67
TRAPPC3-204ENST00000373166 MRFAP1L1Q96HT8 127 aa19.24■□□□□ 0.67
TRAPPC3-204ENST00000373166 WDR92Q96MX6 357 aa19.24■□□□□ 0.67
TRAPPC3-204ENST00000373166 ANP32EQ9BTT0 268 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms