RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 UMODL1-AS1Q8N2C9 162 aa10.7□□□□□ -0.7
TPM3-212ENST00000368533 PDZD8Q8NEN9 1154 aa10.7□□□□□ -0.7
TPM3-212ENST00000368533 MRGPRX2Q96LB1 330 aa10.7□□□□□ -0.7
TPM3-212ENST00000368533 KLHL4Q9C0H6 718 aa10.7□□□□□ -0.7
TPM3-212ENST00000368533 PRDM16Q9HAZ2 1276 aa10.7□□□□□ -0.7
TPM3-212ENST00000368533 FCF1Q9Y324 198 aaKnown RBP10.7□□□□□ -0.7
TPM3-212ENST00000368533 USP34Q70CQ2 3546 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 OR51F1A6NGY5 319 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 GLRA3O75311 464 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 VAPBO95292 243 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 COL6A2P12110 1019 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 PGAM1P18669 254 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 AVPR1AP37288 418 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 MAGEA6P43360 314 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 EMP3P54852 163 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 SLC25A3Q00325 362 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 CTBP1Q13363 440 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 MED21Q13503 144 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 SERINC3Q13530 473 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 HSF5Q4G112 596 aaPredicted RBP10.69□□□□□ -0.7
TPM3-212ENST00000368533 VWA5B1Q5TIE3 1220 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 KCTD11Q693B1 232 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 PSRC1Q6PGN9 363 aaPredicted RBP10.69□□□□□ -0.7
TPM3-212ENST00000368533 KYAT3Q6YP21 454 aaKnown RBP10.69□□□□□ -0.7
TPM3-212ENST00000368533 LZTR1Q8N653 840 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 NAT16Q8N8M0 369 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 MRPL43Q8N983 215 aaKnown RBP10.69□□□□□ -0.7
TPM3-212ENST00000368533 PIWIL2Q8TC59 973 aaKnown RBP10.69□□□□□ -0.7
TPM3-212ENST00000368533 BLOC1S5Q8TDH9 187 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 GAB3Q8WWW8 586 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 NSMCE3Q96MG7 304 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 IL12RB2Q99665 862 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 ASAH2Q9NR71 780 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 MOCS1Q9NZB8 636 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 VPS28Q9UK41 221 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 TRHDEQ9UKU6 1024 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 PCDHGC4Q9Y5F7 938 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 NOTCH4Q99466 2003 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 FOXD2O60548 495 aaPredicted RBP10.69□□□□□ -0.7
TPM3-212ENST00000368533 RING1Q06587 406 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 CDH18Q13634 790 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 CNGA3Q16281 694 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 ATXN7L2Q5T6C5 722 aaPredicted RBP10.69□□□□□ -0.7
TPM3-212ENST00000368533 STRA8Q7Z7C7 330 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 DENND6AQ8IWF6 608 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 CLP1Q92989 425 aaKnown RBP10.69□□□□□ -0.7
TPM3-212ENST00000368533 MYRFLQ96LU7 910 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 ZSWIM3Q96MP5 696 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 TMEM216Q9P0N5 145 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 ANGPTL2Q9UKU9 493 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 IGLV3-10A0A075B6K4 115 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 CCDC85CA6NKD9 419 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 BIRC5O15392 142 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 PLIN3O60664 434 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 PEX2P28328 305 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 GK3PQ14409 553 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 KLC3Q6P597 504 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 RNF111Q6ZNA4 994 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 CMTM8Q8IZV2 173 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 APCDD1Q8J025 514 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 SPATA6LQ8N4H0 392 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 METTL25Q8N6Q8 603 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 GDPD5Q8WTR4 605 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 PPP2R3CQ969Q6 453 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 TMA16Q96EY4 203 aaKnown RBP10.69□□□□□ -0.7
TPM3-212ENST00000368533 UBAP1Q9NZ09 502 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 DCDC2Q9UHG0 476 aa10.69□□□□□ -0.7
TPM3-212ENST00000368533 RPL26L1Q9UNX3 145 aaKnown RBP10.69□□□□□ -0.7
TPM3-212ENST00000368533 MTSS1O43312 755 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 ZMPSTE24O75844 475 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 HSPA4LO95757 839 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 RALBP11234 206 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 CNTFP26441 200 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 HOXD9P28356 352 aaPredicted RBP10.68□□□□□ -0.7
TPM3-212ENST00000368533 HOXD12P35452 270 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 RXRGP48443 463 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 RENBPP51606 427 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 OXCT1P55809 520 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 CDH17Q12864 832 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 MSLNQ13421 630 aaPredicted RBP10.68□□□□□ -0.7
TPM3-212ENST00000368533 ZNF460Q14592 562 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 MMEL1Q495T6 779 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 NADK2Q4G0N4 442 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 ANKRD20A4Q4UJ75 823 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 RABGAP1LQ5R372 815 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 ZNF362Q5T0B9 420 aaPredicted RBP10.68□□□□□ -0.7
TPM3-212ENST00000368533 TIGD7Q6NT04 549 aaPredicted RBP10.68□□□□□ -0.7
TPM3-212ENST00000368533 FBXL19Q6PCT2 694 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 POTEHQ6S545 545 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 TMC8Q8IU68 726 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 ULK2Q8IYT8 1036 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 ELMOD1Q8N336 334 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 OR6Y1Q8NGX8 325 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 ZFP28Q8NHY6 868 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 CERS2Q96G23 380 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 EMILIN2Q9BXX0 1053 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 LINC00597Q9H2U6 94 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 LRRC40Q9H9A6 602 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 DNMT3BQ9UBC3 853 aaKnown RBP10.68□□□□□ -0.7
TPM3-212ENST00000368533 TBC1D30Q9Y2I9 924 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms