RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 FAM117BQ6P1L5 589 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 CES3Q6UWW8 571 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 PID1Q7Z2X4 250 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 ZNF598Q86UK7 904 aaKnown RBP15.92■□□□□ 0.14
HMGA1-202ENST00000347617 FSTL5Q8N475 847 aaPredicted RBP15.92■□□□□ 0.14
HMGA1-202ENST00000347617 TTC30BQ8N4P2 665 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 DHRSXQ8N5I4 330 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 DNAAF3Q8N9W5 541 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 ADAM32Q8TC27 787 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 SPPL2BQ8TCT7 592 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 RAB2BQ8WUD1 216 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 LRRN4Q8WUT4 740 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 EFHD2Q96C19 240 aaPredicted RBP15.92■□□□□ 0.14
HMGA1-202ENST00000347617 PPP1R36Q96LQ0 422 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 VAT1Q99536 393 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 CAB39LQ9H9S4 337 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 POLR1BQ9H9Y6 1135 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 GOLGA2P5Q9HBQ8 144 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 RIC8BQ9NVN3 520 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 MIOSQ9NXC5 875 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.92■□□□□ 0.14
HMGA1-202ENST00000347617 KLHL8Q9P2G9 620 aaPredicted RBP15.92■□□□□ 0.14
HMGA1-202ENST00000347617 FAM32AQ9Y421 112 aaKnown RBP15.92■□□□□ 0.14
HMGA1-202ENST00000347617 DHRS12A0PJE2 317 aa15.91■□□□□ 0.14
HMGA1-202ENST00000347617 ZNF839A8K0R7 811 aa15.91■□□□□ 0.14
HMGA1-202ENST00000347617 H0YAE9 185 aa15.91■□□□□ 0.14
HMGA1-202ENST00000347617 BCL10O95999 233 aa15.91■□□□□ 0.14
HMGA1-202ENST00000347617 NELFEP18615 380 aaKnown RBP15.91■□□□□ 0.14
HMGA1-202ENST00000347617 GJA8P48165 433 aa15.91■□□□□ 0.14
HMGA1-202ENST00000347617 TKTL1P51854 596 aa15.91■□□□□ 0.14
HMGA1-202ENST00000347617 STX1BP61266 288 aa15.91■□□□□ 0.14
HMGA1-202ENST00000347617 CTBSQ01459 385 aa15.91■□□□□ 0.14
HMGA1-202ENST00000347617 FOXM1Q08050 763 aa15.91■□□□□ 0.14
HMGA1-202ENST00000347617 NFATC3Q12968 1075 aa15.91■□□□□ 0.14
HMGA1-202ENST00000347617 PMS2P3Q13401 168 aa15.91■□□□□ 0.14
HMGA1-202ENST00000347617 NR1D2Q14995 579 aa15.91■□□□□ 0.14
HMGA1-202ENST00000347617 UPP1Q16831 310 aa15.91■□□□□ 0.14
HMGA1-202ENST00000347617 CCNYL2Q5T2Q4 361 aa15.91■□□□□ 0.14
HMGA1-202ENST00000347617 GPR107Q5VW38 600 aa15.91■□□□□ 0.14
HMGA1-202ENST00000347617 NANOGP8Q6NSW7 305 aa15.91■□□□□ 0.14
HMGA1-202ENST00000347617 CBR4Q8N4T8 237 aa15.91■□□□□ 0.14
HMGA1-202ENST00000347617 ATXN7L3BQ96GX2 97 aa15.91■□□□□ 0.14
HMGA1-202ENST00000347617 SENP8Q96LD8 212 aa15.91■□□□□ 0.14
HMGA1-202ENST00000347617 AGAP2Q99490 1192 aa15.91■□□□□ 0.14
HMGA1-202ENST00000347617 TRMOQ9BU70 441 aa15.91■□□□□ 0.14
HMGA1-202ENST00000347617 IARS2Q9NSE4 1012 aaKnown RBP15.91■□□□□ 0.14
HMGA1-202ENST00000347617 ABCD2Q9UBJ2 740 aa15.91■□□□□ 0.14
HMGA1-202ENST00000347617 NDUFAF1Q9Y375 327 aa15.91■□□□□ 0.14
HMGA1-202ENST00000347617 GPC6Q9Y625 555 aaPredicted RBP15.91■□□□□ 0.14
HMGA1-202ENST00000347617 A0A1W2PPW3 197 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 MEIS3P2A8K0S8 358 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 DLGAP1O14490 977 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 SLC35E2BP0CK96 405 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 UMPSP11172 480 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 CKMT2P17540 419 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 TFE3P19532 575 aaPredicted RBP15.9■□□□□ 0.14
HMGA1-202ENST00000347617 LMO2P25791 158 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 MAP4P27816 1152 aaKnown RBP15.9■□□□□ 0.14
HMGA1-202ENST00000347617 AIF1P55008 147 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 RAB10P61026 200 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 KCTD11Q693B1 232 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 NEK10Q6ZWH5 1172 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 LINC00523Q86TU6 105 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 CNTN4Q8IWV2 1026 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 B3GALNT2Q8NCR0 500 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 CCNYQ8ND76 341 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 OR13F1Q8NGS4 319 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 RNF139Q8WU17 664 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 MARK4Q96L34 752 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.9■□□□□ 0.141e-11■■■■■ 50.4
HMGA1-202ENST00000347617 SEPT10Q9P0V9 454 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 ACTR3BQ9P1U1 418 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 TCAF1Q9Y4C2 921 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 RNF103-CHMP3A0A140T963 221 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 SAC3D1A6NKF1 404 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 DNAJB5O75953 348 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 CLPXO76031 633 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 CYP11A1P05108 521 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 JAK1P23458 1154 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 GMPRP36959 345 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 BMXP51813 675 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 ZNF846Q147U1 533 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 COQ5Q5HYK3 327 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 TMEM53Q6P2H8 277 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 ZNF773Q6PK81 442 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 KCTD8Q6ZWB6 473 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 SLC24A5Q71RS6 500 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 SCUBE3Q8IX30 993 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 CCDC185Q8N715 623 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 CCNYL1Q8N7R7 359 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 KCTD4Q8WVF5 259 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 CANT1Q8WVQ1 401 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 ACDQ96AP0 544 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 KIFC1Q9BW19 673 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 GBA3Q9H227 469 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 DPEP3Q9H4B8 488 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 PRDM12Q9H4Q4 367 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 RNF19AQ9NV58 838 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 TBC1D13Q9NVG8 400 aa15.9■□□□□ 0.14
HMGA1-202ENST00000347617 SMPD3Q9NY59 655 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms