RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 PIM3Q86V86 326 aa18.43■□□□□ 0.54
USP39-201ENST00000323701 GPR150Q8NGU9 434 aa18.43■□□□□ 0.54
USP39-201ENST00000323701 SMARCD2Q92925 531 aa18.43■□□□□ 0.54
USP39-201ENST00000323701 MOCOSQ96EN8 888 aa18.43■□□□□ 0.54
USP39-201ENST00000323701 MRGPRX3Q96LB0 322 aa18.43■□□□□ 0.54
USP39-201ENST00000323701 GPR78Q96P69 363 aa18.43■□□□□ 0.54
USP39-201ENST00000323701 TSSK1BQ9BXA7 367 aa18.43■□□□□ 0.54
USP39-201ENST00000323701 CATSPERZQ9NTU4 200 aa18.43■□□□□ 0.54
USP39-201ENST00000323701 FBXO10Q9UK96 956 aa18.43■□□□□ 0.54
USP39-201ENST00000323701 ZNF711Q9Y462 761 aa18.43■□□□□ 0.54
USP39-201ENST00000323701 DOCK8Q8NF50 2099 aa18.43■□□□□ 0.54
USP39-201ENST00000323701 G3V2L1 256 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 TK2O00142 265 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 FGF3P11487 239 aaPredicted RBP18.42■□□□□ 0.54
USP39-201ENST00000323701 STMN1P16949 149 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 ARRB2P32121 409 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 CCNHP51946 323 aaPredicted RBP18.42■□□□□ 0.54
USP39-201ENST00000323701 PEX6Q13608 980 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 PSAPL1Q6NUJ1 521 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 TMEM207Q6UWW9 146 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 SFTPA1Q8IWL2 248 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 E2F7Q96AV8 911 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 NXNL1Q96CM4 212 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 COPG2Q9UBF2 871 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 A0A0J9YYE9 177 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 TRBC1P01850 177 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 ADH5P11766 374 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 CA5AP35218 305 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 HNF1BP35680 557 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 HADHAP40939 763 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 GRIA4P48058 902 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 SLC6A11P48066 632 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 STC1P52823 247 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 LAMB3Q13751 1172 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 CDKN3Q16667 212 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 HECTD2Q5U5R9 776 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 TANGO2Q6ICL3 276 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 BPIFB1Q8TDL5 484 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 ISG20Q96AZ6 181 aaKnown RBP18.42■□□□□ 0.54
USP39-201ENST00000323701 FAM136AQ96C01 138 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 ATP13A3Q9H7F0 1226 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 ACSS2Q9NR19 701 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 IL17CQ9P0M4 197 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 TLK1Q9UKI8 766 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 ERVW-1Q9UQF0 538 aa18.42■□□□□ 0.54
USP39-201ENST00000323701 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.41■□□□□ 0.54
USP39-201ENST00000323701 ANTXRLA6NF34 631 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 HEPACAM2A8MVW5 462 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 TTC34A8MYJ7 566 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.41■□□□□ 0.54
USP39-201ENST00000323701 SLC9A3R1O14745 358 aaPredicted RBP18.41■□□□□ 0.54
USP39-201ENST00000323701 KLF11O14901 512 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 BIRC5O15392 142 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 POU4F1Q01851 419 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 LRRC73Q5JTD7 316 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 GALNT7Q86SF2 657 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 TSPAN33Q86UF1 283 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 ZNF366Q8N895 744 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.41■□□□□ 0.54
USP39-201ENST00000323701 OR2A12Q8NGT7 310 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 RFWD2Q8NHY2 731 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 ANKRD49Q8WVL7 239 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 CCDC97Q96F63 343 aaPredicted RBP18.41■□□□□ 0.54
USP39-201ENST00000323701 ZDHHC6Q9H6R6 413 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 NMRAL1Q9HBL8 299 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 MAGEE1Q9HCI5 957 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 NPHS2Q9NP85 383 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 ABCF3Q9NUQ8 709 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 SLC25A13Q9UJS0 675 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 RUVBL2Q9Y230 463 aaKnown RBP18.41■□□□□ 0.54
USP39-201ENST00000323701 ACOT9Q9Y305 439 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 BRWD1Q9NSI6 2320 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 HGSO14964 777 aaPredicted RBP18.41■□□□□ 0.54
USP39-201ENST00000323701 ITM2AO43736 263 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 LYPLA1O75608 230 aaPredicted RBP18.41■□□□□ 0.54
USP39-201ENST00000323701 GSTA1P08263 222 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 SNRPD1P62314 119 aaKnown RBP18.41■□□□□ 0.54
USP39-201ENST00000323701 XIAPP98170 497 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 DLX2Q07687 328 aaPredicted RBP18.41■□□□□ 0.54
USP39-201ENST00000323701 ITIH4Q14624 930 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 PTPRNQ16849 979 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 FRS2Q8WU20 508 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 TIFAQ96CG3 184 aa18.41■□□□□ 0.54
USP39-201ENST00000323701 NPIPB15A6NHN6 443 aaPredicted RBP18.4■□□□□ 0.54
USP39-201ENST00000323701 STX7O15400 261 aaKnown RBP18.4■□□□□ 0.54
USP39-201ENST00000323701 TULP3O75386 442 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 CLDN7O95471 211 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 MC4RP32245 332 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 CLCN5P51795 746 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 OCRLQ01968 901 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 TYSND1Q2T9J0 566 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 CARD16Q5EG05 197 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 MRNIPQ6NTE8 343 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 FSTL5Q8N475 847 aaPredicted RBP18.4■□□□□ 0.54
USP39-201ENST00000323701 GRIN3AQ8TCU5 1115 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 NAT14Q8WUY8 206 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 NXPE3Q969Y0 559 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 FAM83CQ9BQN1 747 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 CIPCQ9C0C6 399 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 VWA7Q9Y334 891 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms