RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 FCGR1BQ92637 280 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 TIFAQ96CG3 184 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 ASB8Q9H765 288 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 AASSQ9UDR5 926 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 TARBP1Q13395 1621 aaKnown RBP15.5■□□□□ 0.07
HCFC1-201ENST00000310441 BAZ2AQ9UIF9 1905 aaKnown RBP15.5■□□□□ 0.07
HCFC1-201ENST00000310441 KIF1AQ12756 1690 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 PDCD5O14737 125 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 TULP3O75386 442 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 PRH1P02810 166 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 PTPN5P54829 565 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 RD3Q7Z3Z2 195 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 KCNS3Q9BQ31 491 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 ZYG11BQ9C0D3 744 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 SEC14L3Q9UDX4 400 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 CHD2O14647 1828 aaKnown RBP15.49■□□□□ 0.07
HCFC1-201ENST00000310441 AP5Z1O43299 807 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 NUAK1O60285 661 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 CCNKO75909 580 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 PAPSS2O95340 614 aaPredicted RBP15.49■□□□□ 0.07
HCFC1-201ENST00000310441 SERPINA3P01011 423 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 ZNF12P17014 697 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 DRG2P55039 364 aaKnown RBP15.49■□□□□ 0.07
HCFC1-201ENST00000310441 APTXQ7Z2E3 356 aaKnown RBP15.49■□□□□ 0.07
HCFC1-201ENST00000310441 UNC93AQ86WB7 457 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 MSL3Q8N5Y2 521 aaKnown RBP15.49■□□□□ 0.07
HCFC1-201ENST00000310441 RP1L1Q8IWN7 2480 aaPredicted RBP15.49■□□□□ 0.07
HCFC1-201ENST00000310441 CASTOR2A6NHX0 329 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 FADS2P1A8MWK0 482 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 H3BRB1 525 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 KELP23276 732 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 CES5AQ6NT32 575 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 GALNT7Q86SF2 657 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 SCUBE3Q8IX30 993 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 TUT1Q9H6E5 874 aaKnown RBP15.49■□□□□ 0.07
HCFC1-201ENST00000310441 OR12D3Q9UGF7 316 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 BTNL10A8MVZ5 291 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 SAGP10523 405 aaPredicted RBP15.49■□□□□ 0.07
HCFC1-201ENST00000310441 GRIK4Q16099 956 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 DEF8Q6ZN54 512 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 C12orf56Q8IXR9 622 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 WNT8BQ93098 351 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 RNF31Q96EP0 1072 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 PEX16Q9Y5Y5 336 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 NFASCO94856 1347 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 PITPNM1O00562 1244 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 GNB5O14775 395 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 GAL3ST3Q96A11 431 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 TMEM39BQ9GZU3 492 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 PAK6Q9NQU5 681 aaPredicted RBP15.49■□□□□ 0.07
HCFC1-201ENST00000310441 PCDHGB5Q9Y5G0 923 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 TRIM3O75382 744 aaPredicted RBP15.49■□□□□ 0.07
HCFC1-201ENST00000310441 SMARCB1Q12824 385 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 SYNPO2Q9UMS6 1093 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 ECHS1P30084 290 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 CTSKP43235 329 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 PERM1Q5SV97 790 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 DNAJB14Q8TBM8 379 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 MTFMTQ96DP5 389 aaKnown RBP15.49■□□□□ 0.07
HCFC1-201ENST00000310441 NINJ2Q9NZG7 142 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 CLEC4AQ9UMR7 237 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 BCKDKO14874 412 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 MT-CO1P00395 513 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 SLC35G4P0C7Q5 338 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 CXCL8P10145 99 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 CD86P42081 329 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 RBM34P42696 430 aaKnown RBP15.49■□□□□ 0.07
HCFC1-201ENST00000310441 ZNF143P52747 638 aaPredicted RBP15.49■□□□□ 0.07
HCFC1-201ENST00000310441 E2F2Q14209 437 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 RANBP3LQ86VV4 465 aaPredicted RBP15.49■□□□□ 0.07
HCFC1-201ENST00000310441 RASAL3Q86YV0 1011 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 ZNF615Q8N8J6 731 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 OR5T3Q8NGG3 340 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 EDEM1Q92611 657 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 BRD9Q9H8M2 597 aa15.49■□□□□ 0.07
HCFC1-201ENST00000310441 PRR5P85299 388 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 FNBP1LQ5T0N5 605 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 TTYH1Q9H313 450 aaPredicted RBP15.48■□□□□ 0.07
HCFC1-201ENST00000310441 FAM172BPA6NC97 362 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 KDELR1P24390 212 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 ADRA1DP25100 572 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 CLCN3P51790 818 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 FTHL17Q9BXU8 183 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 SPON1Q9HCB6 807 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 PIGBOS1A0A0B4J2F0 54 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 ZNF286BP0CG31 522 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.48■□□□□ 0.073e-6■■■■■ 39.2
HCFC1-201ENST00000310441 RAET1GQ6H3X3 334 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 FBXO33Q7Z6M2 555 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 HPS1Q92902 700 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 PPCDCQ96CD2 204 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 ANKRD26Q9UPS8 1709 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 CAP2P40123 477 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 GABRB2P47870 512 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 SIX5Q8N196 739 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 HJURPQ8NCD3 748 aaPredicted RBP15.48■□□□□ 0.07
HCFC1-201ENST00000310441 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.48■□□□□ 0.07
HCFC1-201ENST00000310441 SLC6A15Q9H2J7 730 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 SP140LQ9H930 580 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 RPTORQ8N122 1335 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms