RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 VARSP26640 1264 aaKnown RBP11.62□□□□□ -0.55
PFDN1-201ENST00000261813 MAOBP27338 520 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 CDK16Q00536 496 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 HLTFQ14527 1009 aaKnown RBP eCLIP11.62□□□□□ -0.55
PFDN1-201ENST00000261813 MORF4L2Q15014 288 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 ANKRD20A2Q5SQ80 823 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 ANKRD20A1Q5TYW2 823 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 ANKRD20A3Q5VUR7 823 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 LYSMD4Q5XG99 296 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 SEL1L3Q68CR1 1132 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 PPP1R21Q6ZMI0 780 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 CCNI2Q6ZMN8 369 aaPredicted RBP11.62□□□□□ -0.55
PFDN1-201ENST00000261813 HOOK3Q86VS8 718 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 CCDC110Q8TBZ0 833 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 PIH1D2Q8WWB5 315 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 IFT81Q8WYA0 676 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 FOXJ1Q92949 421 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 LOXL4Q96JB6 756 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 GORASP1Q9BQQ3 440 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 EBF2Q9HAK2 575 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 PCDH12Q9NPG4 1184 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 TMEM74BQ9NUR3 256 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 RSPH14Q9UHP6 348 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 ANAPC5Q9UJX4 755 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 ZFR2Q9UPR6 939 aaKnown RBP11.62□□□□□ -0.55
PFDN1-201ENST00000261813 CHKBQ9Y259 395 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 SNX24Q9Y343 169 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 PCDHB9Q9Y5E1 797 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 SLCO1B1Q9Y6L6 691 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 ABCA7Q8IZY2 2146 aa11.62□□□□□ -0.55
PFDN1-201ENST00000261813 ANKRD36A6QL64 1941 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 THADAQ6YHU6 1953 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 A0A1W2PQ67 120 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 A0A1W2PQU0 124 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 E7EVH7 732 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 AP3B1O00203 1094 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 DNALI1O14645 258 aaPredicted RBP11.61□□□□□ -0.55
PFDN1-201ENST00000261813 LATO43561 262 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 PCDH8O95206 1070 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 MAT2AP31153 395 aaKnown RBP11.61□□□□□ -0.55
PFDN1-201ENST00000261813 RPL22P35268 128 aaKnown RBP11.61□□□□□ -0.55
PFDN1-201ENST00000261813 RPL21P46778 160 aaKnown RBP11.61□□□□□ -0.55
PFDN1-201ENST00000261813 CCR5P51681 352 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 SUOXP51687 545 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 SEMG2Q02383 582 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 CREB5Q02930 508 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 RALGDSQ12967 914 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 PTPRRQ15256 657 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 SLC14A2Q15849 920 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 RSPO4Q2I0M5 234 aaPredicted RBP11.61□□□□□ -0.55
PFDN1-201ENST00000261813 TMEM259Q4ZIN3 620 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 ARMC12Q5T9G4 340 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 PEAR1Q5VY43 1037 aaPredicted RBP11.61□□□□□ -0.55
PFDN1-201ENST00000261813 CYP2U1Q7Z449 544 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 TRIM69Q86WT6 500 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 PPIL6Q8IXY8 311 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 DCLK2Q8N568 766 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 HNRNPLLQ8WVV9 542 aaKnown RBP11.61□□□□□ -0.55
PFDN1-201ENST00000261813 DNASE2BQ8WZ79 361 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 SNX19Q92543 992 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 OXNAD1Q96HP4 312 aaPredicted RBP11.61□□□□□ -0.55
PFDN1-201ENST00000261813 SMIM14Q96QK8 99 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 FCRL5Q96RD9 977 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 TRIM51Q9BSJ1 452 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 TRIM31Q9BZY9 425 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 GBA3Q9H227 469 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 ARRDC1-AS1Q9H2J1 176 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 DPH5Q9H2P9 285 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 UBP1Q9NZI7 540 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 PILRBQ9UKJ0 227 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 SHOC2Q9UQ13 582 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 AAR2Q9Y312 384 aaKnown RBP11.61□□□□□ -0.55
PFDN1-201ENST00000261813 FRYLO94915 3013 aa11.61□□□□□ -0.55
PFDN1-201ENST00000261813 A0A1W2PPC4 97 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 TSPAN6O43657 245 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 ANXA9O76027 345 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 SEC31AO94979 1220 aaKnown RBP11.6□□□□□ -0.55
PFDN1-201ENST00000261813 RETP07949 1114 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 CTPS1P17812 591 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 XPAP23025 273 aaPredicted RBP11.6□□□□□ -0.55
PFDN1-201ENST00000261813 PSMB4P28070 264 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 MMP12P39900 470 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 MPLP40238 635 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 LMAN1P49257 510 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 POLR2LP62875 67 aaKnown RBP11.6□□□□□ -0.55
PFDN1-201ENST00000261813 ELP6Q0PNE2 266 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 FGL2Q14314 439 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 TRIP13Q15645 432 aaPredicted RBP11.6□□□□□ -0.55
PFDN1-201ENST00000261813 CCDC6Q16204 474 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 PCSK7Q16549 785 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 ZNF284Q2VY69 593 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 TMEM52BQ4KMG9 183 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 WDR45BQ5MNZ6 344 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 SYCP2LQ5T4T6 812 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 IZUMO3Q5VZ72 239 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 KIAA1161Q6NSJ0 714 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 ERAP2Q6P179 960 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 NEK5Q6P3R8 708 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 EMBQ6PCB8 327 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 KDELC1Q6UW63 502 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms