RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 ZBTB49Q6ZSB9 765 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 ZCCHC23Q6ZST2 131 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 CATSPER4Q7RTX7 472 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 TMEM151BQ8IW70 566 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 MFSD4AQ8N468 514 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 TTLQ8NG68 377 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 CNPY3Q9BT09 278 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 BEGAINQ9BUH8 593 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 FARSBQ9NSD9 589 aaKnown RBP13.66□□□□□ -0.22
GABPB1-201ENST00000220429 C20orf96Q9NUD7 363 aaPredicted RBP13.66□□□□□ -0.22
GABPB1-201ENST00000220429 BOLA1Q9Y3E2 137 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 SEC14L2O76054 403 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 CPNE6O95741 557 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 PDGFRAP16234 1089 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 ME2P23368 584 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 IDH3AP50213 366 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 MMRN1Q13201 1228 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 CEACAM7Q14002 265 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 FAM110CQ1W6H9 321 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 PMF1Q6P1K2 205 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 SLC27A1Q6PCB7 646 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 ACOT1Q86TX2 421 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 UNC45BQ8IWX7 931 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 RNF148Q8N7C7 305 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 OR10Z1Q8NGY1 313 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 CPT1BQ92523 772 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 DACT3Q96B18 629 aaPredicted RBP13.66□□□□□ -0.22
GABPB1-201ENST00000220429 C18orf25Q96B23 403 aaPredicted RBP13.66□□□□□ -0.22
GABPB1-201ENST00000220429 HDAC11Q96DB2 347 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 ZNF778Q96MU6 729 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 OSMRQ99650 979 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 C17orf62Q9BQA9 187 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 ZSCAN5AQ9BUG6 496 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 C1QTNF7Q9BXJ2 289 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 RSPH9Q9H1X1 276 aaPredicted RBP13.66□□□□□ -0.22
GABPB1-201ENST00000220429 DIABLOQ9NR28 239 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 RNF19AQ9NV58 838 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 DNMT3LQ9UJW3 386 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 GJD2Q9UKL4 321 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 CENPXA8MT69 81 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 APOC4-APOC2K7ER74 178 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 ENDOD1O94919 500 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 APOC2P02655 101 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 RPL22P35268 128 aaKnown RBP13.65□□□□□ -0.22
GABPB1-201ENST00000220429 COX10Q12887 443 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 ZBTB6Q15916 424 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 CDO1Q16878 200 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 PKDCCQ504Y2 493 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 GLRA4Q5JXX5 417 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 PRAMEF19Q5SWL8 479 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 ATAD3CQ5T2N8 411 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 LINC00299Q6ZSB3 139 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 LACC1Q8IV20 430 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 PALM2Q8IXS6 379 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 ADGRG5Q8IZF4 528 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 DSELQ8IZU8 1212 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 SNX19Q92543 992 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 RPRD1BQ9NQG5 326 aaKnown RBP13.65□□□□□ -0.22
GABPB1-201ENST00000220429 SMOXQ9NWM0 555 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 TOR4AQ9NXH8 423 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 SNX13Q9Y5W8 968 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 RRN3P2A6NIE6 340 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 PHGDHO43175 533 aaKnown RBP13.65□□□□□ -0.22
GABPB1-201ENST00000220429 DLGAP3O95886 979 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 INHBAP08476 426 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 SMIM10L2AP0DMW4 78 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 SMIM10L2BP0DMW5 78 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 PIK3R1P27986 724 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 NME5P56597 212 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 RAD51Q06609 339 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 TNK2Q07912 1038 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 TARDBPQ13148 414 aaKnown RBP eCLIP13.65□□□□□ -0.22
GABPB1-201ENST00000220429 SDE2Q6IQ49 451 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 CLYBLQ8N0X4 340 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 KYQ8NBH2 561 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 ZSCAN18Q8TBC5 510 aaPredicted RBP13.65□□□□□ -0.22
GABPB1-201ENST00000220429 RSAD2Q8WXG1 361 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 PARK7Q99497 189 aaKnown RBP13.65□□□□□ -0.22
GABPB1-201ENST00000220429 RSAD1Q9HA92 442 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 TIGARQ9NQ88 270 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 FAM49BQ9NUQ9 324 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 DNAJC28Q9NX36 388 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.65□□□□□ -0.22
GABPB1-201ENST00000220429 COPG2Q9UBF2 871 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 DERAQ9Y315 318 aa13.65□□□□□ -0.22
GABPB1-201ENST00000220429 A0A0G2JMP0 313 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 TOR1BO14657 336 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 PDPK1O15530 556 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 BMP4P12644 408 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 HTR2BP41595 481 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 NRLP54845 237 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 CDH6P55285 790 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 KLF10Q13118 480 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 ZFP69Q49AA0 526 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 SLC9A4Q6AI14 798 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 NPNTQ6UXI9 565 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 IFNL1Q8IU54 200 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 PPIL6Q8IXY8 311 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 TAB3Q8N5C8 712 aaPredicted RBP13.64□□□□□ -0.23
GABPB1-201ENST00000220429 NAT8LQ8N9F0 302 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms