RNA–Protein interactions for RNA: ENSMUST00000108856.8

Col20a1-201, Transcript of Collagen alpha-1(XX) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col20a1, Length 4,489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1-201ENSMUST00000108856 Gm45233A0A0N4SVE0 221 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Fam155bA2BDP1 471 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Gm17615E9Q9P2 165 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Vmn1r39G3UWE6 305 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Kcnn4O89109 425 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Mtnd4P03911 459 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Rhox5P52651 210 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Ldb1P70662 411 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Dnajb14Q149L6 379 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Spc25Q3UA16 226 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Trafd1Q3UDK1 580 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Slc39a14Q75N73 489 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Olfr213Q7TS32 327 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Ahcyl1Q80SW1 530 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Pqlc1Q80XM9 271 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Rmdn2Q8BSE0 410 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 AA792892Q8C6S1 278 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 RorbQ8R1B8 470 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Mark1Q8VHJ5 795 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Slc25a19Q9DAM5 318 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Kat2aQ9JHD2 830 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Actl7bQ9QY83 418 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Tmem265E9Q8G3 109 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Gm3164L7N2B9 238 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Gm3264L7N2C5 238 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 S100a6P14069 89 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Mapk1P63085 358 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Shox2P70390 331 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Fmo3P97501 534 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Dnal1Q05A62 190 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Ampd1Q3V1D3 745 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Mrm3Q5ND52 418 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Ddx5Q61656 614 aaKnown RBP11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 KdsrQ6GV12 332 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Colgalt2Q6NVG7 625 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Scube1Q6NZL8 1018 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 ZfatQ7TS63 1237 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Clptm1lQ8BXA5 539 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Rsph1Q8VIG3 301 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Gemin2Q9CQQ4 269 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 ArskQ9D2L1 553 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Tmem81Q9D5K1 259 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Fam83dQ9D7I8 585 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Nkx2-4Q9EQM3 354 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Vnn3Q9QZ25 500 aa11.17□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Catsperg2C6KI89 1145 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Hsd17b14E9Q3D4 273 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Calhm3J3QMI4 347 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Cxcr3O88410 367 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Erp29P57759 262 aaKnown RBP11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Mtf2Q02395 593 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Aldh16a1Q571I9 802 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Stxbp5lQ5DQR4 1185 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Gm11487Q5RIS0 354 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Nr1h2Q60644 446 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 XiapQ60989 496 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Mef2dQ63943 514 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Cyp2r1Q6VVW9 501 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Arrdc3Q7TPQ9 414 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Trmt10aQ8C1Z8 328 aaKnown RBP11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Smyd2Q8R5A0 433 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Mrgpra2Q91WW4 305 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Prpf19Q99KP6 504 aaKnown RBP11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Chmp1b1Q99LU0 199 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Rpl17Q9CPR4 184 aaKnown RBP11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Hnrnpa0Q9CX86 305 aaKnown RBP11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Pgm3Q9CYR6 542 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 4930524N10RikQ9D519 233 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Leng1Q9DB98 261 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Grm3Q9QYS2 879 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Cib1Q9Z0F4 191 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 VarsQ9Z1Q9 1263 aaKnown RBP11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Cacna1bO55017 2327 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Gm28961A0A087WPA5 222 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Gm21858A0A087WQ24 222 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Ptpn3A2ALK8 913 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Kif28pD3YXS5 1028 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Adamts6D3Z1A5 1117 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 LtfP08071 707 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 TfamP40630 243 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Mapkapk3Q3UMW7 384 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Zfp280bQ505F4 534 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Fnip1Q68FD7 1165 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Stmnd1Q6P3A1 279 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Zfp759Q7M6X3 721 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Defb34Q7TNV8 81 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 AW551984Q8BGF0 804 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Sfrp1Q8C4U3 314 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 H2afy2Q8CCK0 372 aaKnown RBP11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Rnf8Q8VC56 488 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Olfr697Q8VFM4 317 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Smap1Q91VZ6 440 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Mgat4dQ9D4R2 373 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Umodl1Q5DID3 1319 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 Gm13089A2AGW7 455 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 MndalD0QMC3 538 aaKnown RBP11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 EgfP01132 1217 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 GscQ02591 256 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 LvrnQ2KHK3 559 aa11.16□□□□□ -0.62
Col20a1-201ENSMUST00000108856 AcdQ5EE38 416 aa11.16□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms