RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Gbp11A9YVJ5 442 aa9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 ComtO88587 265 aa9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Ly6aP05533 134 aa9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 CryaaP24622 196 aa9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Hnf1bP27889 558 aa9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Igfbp2P47877 305 aa9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Hnrnpa1P49312 320 aaKnown RBP9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Ptpn5P54830 541 aa9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Aup1P70295 410 aa9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Smad4P97471 551 aa9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Mdga1Q0PMG2 940 aa9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Grhl3Q5FWH3 603 aa9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 BadQ61337 204 aa9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Il10raQ61727 575 aa9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Zrsr2Q62377 462 aaKnown RBP9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Atp2c1Q80XR2 918 aa9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Zfyve1Q810J8 777 aa9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Tmem108Q8BHE4 574 aa9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Slc41a1Q8BJA2 512 aa9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Mapk8Q91Y86 384 aa9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Syt17Q920M7 470 aa9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Plpp3Q99JY8 312 aa9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Susd3Q9D176 269 aa9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Lmx1aQ9JKU8 382 aa9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Msh5Q9QUM7 833 aa9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Mfap5Q9QZJ6 164 aa9.96□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Tcte1A6H639 498 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Pnldc1B2RXZ1 531 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Zfp169E9Q3R6 731 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Nthl1O35980 300 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Npr1P18293 1057 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Fcgr1P26151 404 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 ADGRF3Q58Y75 991 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Ppp1r13lQ5I1X5 824 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Brsk1Q5RJI5 778 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gngt1Q61012 74 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Bpifb1Q61114 474 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Dhx33Q80VY9 698 aaKnown RBP9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Vipas39Q8BGQ1 491 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 MtbpQ8BJS8 894 aaKnown RBP9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Ttc34Q8C0Q3 554 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Mettl3Q8C3P7 580 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Wdr26Q8C6G8 641 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Fam161aQ8QZV6 448 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Tmem80Q9D3H0 123 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Agpat3Q9D517 376 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Cab39lQ9DB16 337 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Plscr2Q9DCW2 307 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Ccr10Q9JL21 362 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Sgk2Q9QZS5 367 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Ate1Q9Z2A5 516 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Fam151bD3YUE4 279 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 S100bP50114 92 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gucy2eP52785 1108 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Psmb4P99026 264 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 ChatQ03059 641 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Zbtb48Q1H9T6 681 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Scrn3Q3TMH2 418 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Fam91a1Q3UVG3 837 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gdpd5Q640M6 607 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Q6GQU0 248 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Cand2Q6ZQ73 1235 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 SgtaQ8BJU0 315 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Frs2Q8C180 508 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Treml1Q8K558 317 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Pycr2Q922Q4 320 aaKnown RBP9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Xpo6Q924Z6 1125 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Bcl7aQ9CXE2 210 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Zfp773Q9CZ29 471 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 PikfyveQ9Z1T6 2097 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Igkv10-95A0A0G2JFY3 115 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Olfr566A0A1B0GST0 319 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Ajm1A2AJA9 974 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gbp4A4UUI3 631 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Vmn2r59E9PUT5 865 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Ifnar2O35664 513 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Kif5cP28738 956 aaKnown RBP9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Htr7P32304 448 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Creb1Q01147 341 aaKnown RBP9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Nomo1Q6GQT9 1214 aaKnown RBP9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Nudcd1Q6PIP5 582 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Zfp398Q8BV16 643 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Slc39a13Q8BZH0 361 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Dedd2Q8QZV0 330 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Nrif1Q923B3 828 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Rgs18Q99PG4 235 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Spc24Q9D083 201 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 SrpraQ9DBG7 636 aaKnown RBP9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Ap4b1Q9WV76 738 aa9.95□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Zfp846G3X996 541 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Pabpc4lG5E8X2 370 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Vmn2r10K7N621 847 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 MttpO08601 894 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Cd151O35566 253 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 PenkP22005 268 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Scg3P47867 471 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Polr2lP62876 67 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Heatr9Q5QNV8 569 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Ablim3Q69ZX8 682 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Olfr1355Q7TQU9 310 aa9.94□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms