RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Slc16a9Q7TM99 508 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Adipor2Q8BQS5 386 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Abi3Q8BYZ1 367 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Hacd3Q8K2C9 362 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Treml1Q8K558 317 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Lrrc42Q8R2U7 421 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Zkscan3Q91VW9 553 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Snx15Q91WE1 337 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 ChiaQ91XA9 473 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Dhrs1Q99L04 313 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Nsmce3Q9CPR8 279 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gpr63Q9EQQ3 425 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gucy1a3Q9ERL9 691 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Il17dA0A0B4J1G4 205 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ighg3A0A1Y7VJN6 399 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gbp11A9YVJ5 442 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Slfn8B1ARD8 910 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 2310061I04RikB8JJ69 315 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Vmn2r116E9Q6I0 856 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gm45837F7D3W5 961 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Serpinb6eI7HJI3 429 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Vmn2r10K7N621 847 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ccl4P14097 92 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Slfn4Q3UV66 602 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Akap14Q3V0I7 536 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Zfp791Q497V9 528 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Acbd5Q5XG73 508 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Atp2a3Q64518 1038 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Olfr834Q7TRG8 312 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Znf771Q8BJ90 317 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Prss50Q8BLH5 439 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Als2cr12Q8BVM7 383 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Lrrtm3Q8BZ81 582 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Pih1h3bQ8C6P5 218 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Trip10Q8CJ53 603 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Trpm8Q8R4D5 1104 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Rpa1Q8VEE4 623 aaKnown RBP8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Nrif1Q923B3 828 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Pdzd3Q99MJ6 498 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Psmd9Q9CR00 222 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Klhdc8bQ9D2D9 354 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Fbxl12Q9EPX5 326 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Slc12a4Q9JIS8 1085 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Orc3Q9JK30 715 aaKnown RBP8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 CtsmQ9JL96 333 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 GghQ9Z0L8 317 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Net1Q9Z206 595 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Klhl32A2AJX0 620 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gm10715J3QP74 227 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Olfr603L7N1Y4 312 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Cyp4a14O35728 507 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 mt-Co3P00416 261 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Adh5P28474 374 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Fen1P39749 378 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Cnr2P47936 347 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Sox9Q04887 507 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 RilpQ5ND29 369 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Taar8aQ5QD07 344 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Zdhhc18Q5Y5T2 380 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Serpinb6Q60854 378 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Olfr855Q7TRF8 312 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Zbtb33Q8BN78 671 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gpr61Q8C010 449 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Q8C4P0 716 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Vps39Q8R5L3 886 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Plpp3Q99JY8 312 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Vsig1Q9D2J4 407 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Il20Q9JKV9 176 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Nt5cQ9JM14 200 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Bdp1Q571C7 2467 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Zfp811A0A0J9YU71 552 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Olfr566A0A1B0GST0 319 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Kiaa1522A2A7S8 1013 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Vmn1r76F8VQ63 324 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Cyp4f17G3UW78 524 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gm21738J3QP72 227 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 WapP01173 134 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 HdcP23738 662 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Alox15P39654 663 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ap1s1P61967 158 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Snx21Q3UR97 363 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Zbtb2Q3V3W4 514 aaKnown RBP8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Slc9b2Q5BKR2 547 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Defa-rs10Q64263 91 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Kctd12Q6WVG3 327 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Zfp438Q8BFX2 798 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Fbxo9Q8BK06 437 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Slc43a1Q8BSM7 564 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Tmem72Q8C3K5 275 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Cgref1Q8R1U2 281 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Pcdha5Q91Y15 934 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 AslQ91YI0 464 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Macrod1Q922B1 323 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Cyp4f16Q99N17 524 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Zfp773Q9CZ29 471 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ttyh1Q9D3A9 450 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Prss23Q9D6X6 382 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Nsmce1Q9D720 266 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Adam21Q9JI76 729 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Irx5Q9JKQ4 484 aa8.72□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms