RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 PignQ9R1S3 931 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Fbxl18E9PYR1 771 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Fcer2P20693 331 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Hhla1Q3TYV2 514 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Tyw3Q8BSA9 257 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Arhgef19Q8BWA8 802 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Cxxc5Q91WA4 317 aaKnown RBP16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Krt88Q9CPR6 171 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Riok2Q9CQS5 547 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Ube2ql1A0PJN4 161 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Ddi2A2ADY9 399 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 TpmtO55060 240 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Atxn2O70305 1285 aaKnown RBP16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Cxcr3O88410 367 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Olfr813Q7TRH5 310 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Elmo1Q8BPU7 727 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Dlg2Q91XM9 852 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Arl4dQ99PE9 201 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 5530400C23RikQ9D3I0 173 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 CaskO70589 926 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 SptbP15508 2128 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Bcl2a1Q07440 172 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Lgals7O54974 136 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 PrkchP23298 683 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Aldh2P47738 519 aaKnown RBP16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Nudt2P56380 147 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Lgr6Q3UVD5 967 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Trmt2aQ8BNV1 574 aaKnown RBP16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Rdh14Q9ERI6 334 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Zmynd12A2BGJ5 363 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Ttll8A4Q9F1 832 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 EnpepP16406 945 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Irf3P70671 419 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 CenplQ3U3S3 329 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Panx3Q8CEG0 392 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 RhojQ9ER71 214 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 PorcnQ9JJJ7 461 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 1700031M16RikA0A087WSH0 82 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Gm15448F6PZL4 682 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Sod3O09164 251 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Sult3a1O35403 293 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Eif5aP63242 154 aaKnown RBP16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Arf5P84084 180 aaKnown RBP16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Chrna5Q2MKA5 467 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 St7lQ8K4P7 559 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Dus2Q9D7B1 493 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Rsph9Q9D9V4 276 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Resp18P47939 175 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Lgals3bpQ07797 577 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Znf800Q0VEE6 662 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Kctd21Q3URF8 260 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Rad9bQ6WBX7 403 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 TesminQ9WTJ6 475 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Tas2r122D3YU55 309 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 AlpiF8VPQ6 554 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Q32M26 199 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Ifi44lQ9BDB7 447 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Ppp1r3gQ9CW07 347 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Zfp952B0V2W4 504 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Gm3383J3QQ59 259 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Gm3239L7N2D9 227 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Cbx5Q61686 191 aaKnown RBP16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Ankra2Q99PE2 312 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Cyp4a10O88833 509 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Brinp3Q499E0 766 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Inpp4bQ6P1Y8 924 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Sec14l2Q99J08 403 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Mxra8Q9DBV4 442 aa16.6■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Gm5751A2AHC8 147 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Cyp2j13Q3UNV4 503 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 NkaplQ5SZT7 395 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Olfr17Q7TRM9 315 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Lca5lQ8C0X0 741 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Mark1Q8VHJ5 795 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 HlcsQ920N2 722 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Mettl15Q9DCL4 406 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Trim10Q9WUH5 489 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Smarcb1Q9Z0H3 385 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Cntnap5cQ0V8T7 1305 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Olfr625-ps1A0A140T8L4 321 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Sec23aQ01405 765 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Igsf9Q05BQ1 1179 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Spata5Q3UMC0 893 aaKnown RBP16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Bcl2a1bQ497M6 172 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Atp13a3Q5XF89 1219 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Olfr23Q7TRX4 325 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Olfr697Q8VFM4 317 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Dqx1Q924H9 718 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Fam83dQ9D7I8 585 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 VapbQ9QY76 243 aaKnown RBP16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Akirin2B1AXD8 201 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Il18P70380 192 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Nfe2l1Q61985 741 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Castor2Q8CAB8 329 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Iqsec1Q8R0S2 961 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Ggt7Q99JP7 662 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 HaghlQ9DB32 283 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Jph1Q9ET80 660 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Psmb4P99026 264 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Gpalpp1Q69ZC8 346 aa16.59■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 52.3 ms