RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Kirrel2Q7TSU7 700 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ttc34Q8C0Q3 554 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Acsm2Q8K0L3 575 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Igsf8Q8R366 611 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 SarafQ8R3Q0 334 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Zdhhc12Q8VC90 267 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 AslQ91YI0 464 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Unc50Q9CQ61 259 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Plxna4Q80UG2 1893 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Cyp4a29A0A087WPC3 509 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Tbkbp1A2A9T0 611 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Klhl32A2AJX0 620 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Pate3B3GLJ3 98 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Olfr292F8VQ84 308 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 E030030I06RikJ3QML9 246 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Gm11236J3QMS7 360 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Man2b1O09159 1013 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 P01664 111 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Oas1aP11928 367 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Gm11487Q5RIS0 354 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Il17aQ62386 158 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ptk7Q8BKG3 1062 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 OsgepQ8BWU5 335 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Nmur2Q8BZ39 395 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Bhlhe22Q8C6A8 355 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Fam126bQ8C729 530 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 4932414N04RikQ8CEQ9 752 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Oas1gQ8K469 367 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Golm1Q91XA2 393 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Pdia5Q921X9 517 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Glod4Q9CPV4 298 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Katnal2Q9D3R6 539 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Cdh22Q9WTP5 813 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Gria3Q9Z2W9 888 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Rundc3aO08576 446 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Igf2bp1O88477 577 aaKnown RBP12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Tap1P21958 724 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 CidecP56198 239 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Adra1dP97714 562 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Hhla1Q3TYV2 514 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Kpna1Q60960 538 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Shkbp1Q6P7W2 704 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Zpbp2Q6X786 326 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Pnma8aQ80VM8 430 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ccdc151Q8BSN3 593 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Fmo9Q8C116 539 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Olfr348Q8VGK3 313 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Spats2lQ91WJ7 558 aaKnown RBP12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ppp1r2Q9DCL8 206 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Cldn19Q9ET38 224 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Nrip2Q9JHR9 270 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Scube2Q9JJS0 997 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 B9d1Q9R1S0 204 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Coro1cQ9WUM4 474 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Gm3604A0A087WPN2 559 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Wdr49A0A0N4SUK7 710 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Gm5751A2AHC8 147 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Gm13941A2AJ38 245 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ssxb8B1AY40 170 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Olfr414E9Q5P8 317 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ncam2O35136 837 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Grem1O70326 184 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Slc6a20bO88575 635 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 PolP11369 1281 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ccnd1P25322 295 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Cyp2c38P56655 490 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Adcy6Q01341 1165 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Tab3Q571K4 716 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Brsk1Q5RJI5 778 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Sdf4Q61112 361 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 MelkQ61846 643 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Jak2Q62120 1129 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Kiaa1841Q68FF0 718 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ggnbp1Q6K1E7 370 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Casc4Q6P2L7 435 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Zfp719Q8BIV1 735 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Arhgap12Q8C0D4 838 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Pitrm1Q8K411 1036 aaKnown RBP12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Slc6a20aQ8VDB9 592 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Prkag2Q91WG5 566 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ankrd54Q91WK7 299 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Med21Q9CQ39 144 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Tma16Q9CR02 221 aaKnown RBP12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ilf2Q9CXY6 390 aaKnown RBP12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Adamts5Q9R001 930 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 IkbkeQ9R0T8 717 aa12.72□□□□□ -0.37
Rnf4-201ENSMUST00000030992 A0A1Y7VP24 259 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Mroh7A2AVR2 1279 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Rhox3cA2AWM0 215 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Rhox3hL7MU37 215 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Usp2O88623 613 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 P01810 119 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Psmd3P14685 530 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ap1g1P22892 822 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Sstr4P49660 385 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Fdft1P53798 416 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 CtscP97821 462 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Nat9Q3UG98 241 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Rhox3aQ4TU90 215 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Prss53Q571E5 552 aa12.71□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms