RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Gfm2Q8R2Q4 779 aa16.91■□□□□ 0.3
Ctcf-201ENSMUST00000005841 PrkxQ922R0 355 aa16.91■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Sh2d4aQ9D7V1 421 aa16.91■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Ddi1Q9DAF3 408 aa16.91■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Yae1d1Q9DAY6 216 aa16.91■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Nme3Q9WV85 169 aa16.91■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Nup205A0A0J9YUD5 2061 aaKnown RBP16.91■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Ttll8A4Q9F1 832 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Olfr376E9Q4M1 320 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Zfp14P10755 501 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Itih2Q61703 946 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Galnt10Q6P9S7 603 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Mppe1Q80XL7 396 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Sept11Q8C1B7 431 aaKnown RBP16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Mterf1aQ8CHZ9 379 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Iqsec1Q8R0S2 961 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Zfp617Q91WM0 559 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 PudpQ9D5U5 234 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Rrn3B2RS91 656 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Srp72F8VQC1 671 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Grip2G3XA20 1042 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 UcmaQ14BU0 138 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Alg6Q3TAE8 507 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Olfml2bQ3V1G4 746 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Lrrc47Q505F5 581 aaKnown RBP16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Atp6v0d2Q80SY3 350 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Ints11Q9CWS4 600 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Myg1Q9JK81 380 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Shroom3Q9QXN0 1986 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Gm10720D3Z1I5 223 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Slc4a9E9PUP3 929 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Zfp384E9Q1A5 584 aaKnown RBP16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 ClockO08785 855 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Serpinb5P70124 375 aaKnown RBP16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Ceacam5Q3UKK2 947 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Trim75Q3UWZ0 467 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Tex24Q5DP50 351 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Dyrk2Q5U4C9 599 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Rasgrp3Q6NZH9 691 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Rab39aQ8BHD0 217 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Angptl7Q8R1Q3 337 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Slco6d1Q9D5W6 683 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Fam83dQ9D7I8 585 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Homer2Q9QWW1 354 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Cdh17Q9R100 827 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 SisF8VQM5 1818 aa16.9■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Vmn1r3A2AMT7 306 aa16.89■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Gm10406A6NAS4 205 aa16.89■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Gm3373A6NAS7 205 aa16.89■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Gm3252E9PUT9 216 aa16.89■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Gm3002E9PW72 216 aa16.89■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Gm3298E9PW80 205 aa16.89■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Vmn2r11E9Q4X4 861 aa16.89■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Gm3468E9QAJ8 216 aa16.89■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Gm3667K7N757 205 aa16.89■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Prdx5P99029 210 aa16.89■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Gm3558Q5FWC9 205 aa16.89■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Kcnh1Q60603 989 aa16.89■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Foxd4Q60688 444 aa16.89■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Mtnr1aQ61184 353 aa16.89■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Atl1Q8BH66 558 aa16.89■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Vmn1r79Q8R285 306 aa16.89■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Exd2Q8VEG4 650 aaKnown RBP16.89■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Cd209eQ91ZW7 208 aa16.89■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Zfp655Q9CZP3 541 aaKnown RBP16.89■□□□□ 0.3
Ctcf-201ENSMUST00000005841 DgkeQ9R1C6 564 aa16.89■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Fam136b-psA0A140T8T1 138 aa16.89■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Dhx35A2ACQ1 703 aaKnown RBP16.89■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Vmn2r91E9Q2U5 856 aa16.89■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Znf683I7HJS4 458 aa16.89■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Svs4P18419 113 aa16.89■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Lrrc58Q3UGP9 366 aa16.89■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Parp12Q8BZ20 711 aaKnown RBP16.89■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Wdr12Q9JJA4 423 aa16.89■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Vmn2r55G3UWZ4 781 aa16.89■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Speer4cG3UXD1 256 aa16.89■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Trim15G3UY57 292 aa16.89■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Gm10354K7N6A0 256 aa16.89■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Impdh1P50096 514 aa16.89■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Hesx1Q61658 185 aa16.89■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Pik3c3Q6PF93 887 aa16.89■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Lrrc66Q8K0B3 872 aa16.89■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Rbms2Q8VC70 383 aaKnown RBP16.89■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Smim11aQ99J19 55 aa16.89■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Dcdc2cQ9D1B8 347 aa16.89■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Gid8Q9D7M1 228 aa16.89■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Tgm1Q9JLF6 815 aa16.89■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Syt5Q9R0N5 386 aa16.89■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Vmn2r57L7N269 863 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 H2-M9O19442 342 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Hsd17b7O88736 334 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Gabarapl2P60521 117 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Ddx51Q6P9R1 639 aaKnown RBP16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Abcg2Q7TMS5 657 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 DglucyQ8BH86 617 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Impg1Q8R1W8 798 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Unc50Q9CQ61 259 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Acot13Q9CQR4 140 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Fam162aQ9D6U8 155 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Mgea5Q9EQQ9 916 aa16.88■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 42.3 ms