RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 DDX3XO00571 662 aaKnown RBP eCLIP13.88□□□□□ -0.193e-9■■□□□ 12.3
HLA-C-210ENST00000640219 FPGTO14772 594 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 YY2O15391 372 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 SPINT1O43278 529 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 SRGAP2O75044 1071 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 SASH3O75995 380 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 RPLP0P05388 317 aaKnown RBP13.88□□□□□ -0.19
HLA-C-210ENST00000640219 TNFAIP3P21580 790 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 CHRNA3P32297 505 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 SCNN1AP37088 669 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 ETV5P41161 510 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 MAPK10P53779 464 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 OXCT1P55809 520 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 RPS21P63220 83 aaKnown RBP13.88□□□□□ -0.19
HLA-C-210ENST00000640219 C1QBPQ07021 282 aaKnown RBP13.88□□□□□ -0.19
HLA-C-210ENST00000640219 IFI16Q16666 785 aaKnown RBP13.88□□□□□ -0.19
HLA-C-210ENST00000640219 TDRD12Q587J7 1177 aaKnown RBP13.88□□□□□ -0.19
HLA-C-210ENST00000640219 TPRG1LQ5T0D9 272 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 FAM72AQ5TYM5 149 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 FAM72DQ6L9T8 149 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 TRIM72Q6ZMU5 477 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 ERN2Q76MJ5 926 aaKnown RBP13.88□□□□□ -0.19
HLA-C-210ENST00000640219 ATCAYQ86WG3 371 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 FAM72BQ86X60 149 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 MCOLN2Q8IZK6 566 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 PYROXD2Q8N2H3 581 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 SDR16C5Q8N3Y7 309 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 SH2D3CQ8N5H7 860 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 TMIEQ8NEW7 156 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 FAM71BQ8TC56 605 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 FAM172AQ8WUF8 416 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 CCDC74AQ96AQ1 378 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 MIB2Q96AX9 1013 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 CAPZA3Q96KX2 299 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 SELENOOQ9BVL4 669 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 CPEB1Q9BZB8 566 aaKnown RBP13.88□□□□□ -0.19
HLA-C-210ENST00000640219 LACRTQ9GZZ8 138 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 MED4Q9NPJ6 270 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 PSD3Q9NYI0 1048 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 SLC12A6Q9UHW9 1150 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 SNX12Q9UMY4 172 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 DAAM1Q9Y4D1 1078 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 ACTL7AQ9Y615 435 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 ITPR2Q14571 2701 aa13.88□□□□□ -0.19
HLA-C-210ENST00000640219 A0A1W2PQM1 296 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 TCAF2A6NFQ2 919 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 C9orf172C9J069 976 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 SNAP91O60641 907 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 SLC2A3P11169 496 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 KRT3P12035 628 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 CD82P27701 267 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 SDC4P31431 198 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 TNNT3P45378 269 aaPredicted RBP13.87□□□□□ -0.19
HLA-C-210ENST00000640219 HDAC4P56524 1084 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 VSNL1P62760 191 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 CASP8Q14790 479 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 RABGAP1LQ5R372 815 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 ACAD10Q6JQN1 1059 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 KIAA1161Q6NSJ0 714 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 DNAJC24Q6P3W2 148 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 PHACTR4Q8IZ21 702 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 MMGT1Q8N4V1 131 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 C9orf43Q8TAL5 461 aaPredicted RBP13.87□□□□□ -0.19
HLA-C-210ENST00000640219 JPH3Q8WXH2 748 aaPredicted RBP13.87□□□□□ -0.19
HLA-C-210ENST00000640219 TMEM159Q96B96 161 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 ALG14Q96F25 216 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 PGAP3Q96FM1 320 aaPredicted RBP13.87□□□□□ -0.19
HLA-C-210ENST00000640219 FEM1CQ96JP0 617 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 CCDC114Q96M63 670 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 LRRC61Q9BV99 259 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 LRRN3Q9H3W5 708 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 NDFIP2Q9NV92 336 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.87□□□□□ -0.19
HLA-C-210ENST00000640219 SCN8AQ9UQD0 1980 aa13.87□□□□□ -0.19
HLA-C-210ENST00000640219 LRRK1Q38SD2 2015 aa13.86□□□□□ -0.19
HLA-C-210ENST00000640219 CHD5Q8TDI0 1954 aa13.86□□□□□ -0.19
HLA-C-210ENST00000640219 A0A0D9SEW6 157 aa13.86□□□□□ -0.19
HLA-C-210ENST00000640219 RNF103O00237 685 aa13.86□□□□□ -0.19
HLA-C-210ENST00000640219 AGFG2O95081 481 aa13.86□□□□□ -0.19
HLA-C-210ENST00000640219 PRNPP04156 253 aa13.86□□□□□ -0.19
HLA-C-210ENST00000640219 CALB1P05937 261 aa13.86□□□□□ -0.19
HLA-C-210ENST00000640219 GPD1P21695 349 aa13.86□□□□□ -0.19
HLA-C-210ENST00000640219 CD97P48960 835 aa13.86□□□□□ -0.19
HLA-C-210ENST00000640219 KLHL30Q0D2K2 578 aa13.86□□□□□ -0.19
HLA-C-210ENST00000640219 BRMS1LQ5PSV4 323 aa13.86□□□□□ -0.19
HLA-C-210ENST00000640219 HGSNATQ68CP4 663 aa13.86□□□□□ -0.19
HLA-C-210ENST00000640219 SMYD5Q6GMV2 418 aa13.86□□□□□ -0.19
HLA-C-210ENST00000640219 LINGO4Q6UY18 593 aa13.86□□□□□ -0.19
HLA-C-210ENST00000640219 VPS36Q86VN1 386 aa13.86□□□□□ -0.19
HLA-C-210ENST00000640219 ARL10Q8N8L6 244 aa13.86□□□□□ -0.19
HLA-C-210ENST00000640219 NOA1Q8NC60 698 aaKnown RBP13.86□□□□□ -0.19
HLA-C-210ENST00000640219 C3orf20Q8ND61 904 aa13.86□□□□□ -0.19
HLA-C-210ENST00000640219 OR7D4Q8NG98 312 aa13.86□□□□□ -0.19
HLA-C-210ENST00000640219 OR2A12Q8NGT7 310 aa13.86□□□□□ -0.19
HLA-C-210ENST00000640219 TBATAQ96M53 351 aa13.86□□□□□ -0.19
HLA-C-210ENST00000640219 LENG8Q96PV6 779 aaPredicted RBP13.86□□□□□ -0.19
HLA-C-210ENST00000640219 PSMB7Q99436 277 aa13.86□□□□□ -0.19
HLA-C-210ENST00000640219 CMKLR1Q99788 373 aa13.86□□□□□ -0.19
HLA-C-210ENST00000640219 FEM1AQ9BSK4 669 aa13.86□□□□□ -0.19
HLA-C-210ENST00000640219 HDAC8Q9BY41 377 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms