RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 TDRD6O60522 2096 aaKnown RBP4.93□□□□□ -1.62
LINC00550-201ENST00000629293 HELZP42694 1942 aaKnown RBP4.93□□□□□ -1.62
LINC00550-201ENST00000629293 TMCO5BA8MYB1 307 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 HMGB1P1B2RPK0 211 aaPredicted RBP4.93□□□□□ -1.62
LINC00550-201ENST00000629293 MYO1CO00159 1063 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 SDC3O75056 442 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 CBFA2T3O75081 653 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 WISP1O95388 367 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 KRT10P13645 584 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 LCP1P13796 627 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 TNFAIP3P21580 790 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 HLA-FP30511 346 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 OXTRP30559 389 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 AP3M2P53677 418 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 ST8SIA6P61647 398 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 YWHAGP61981 247 aaKnown RBP eCLIP4.93□□□□□ -1.62
LINC00550-201ENST00000629293 MAP4K2Q12851 820 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 KCNT1Q5JUK3 1230 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 SNX30Q5VWJ9 437 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 PRAMEF13Q5VWM6 474 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 IL27RAQ6UWB1 636 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 UNC93AQ86WB7 457 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 HID1Q8IV36 788 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 SIX6OS1Q8N1H7 587 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 CRYBG2Q8N1P7 616 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 SH2D3CQ8N5H7 860 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 EID2Q8N6I1 236 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 DNASE2BQ8WZ79 361 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 ATP6V1G3Q96LB4 118 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 PCDHB18PQ96TA0 734 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 HNRNPABQ99729 332 aaKnown RBP4.93□□□□□ -1.62
LINC00550-201ENST00000629293 DUSP16Q9BY84 665 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 DCLK3Q9C098 648 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 UBE2TQ9NPD8 197 aaPredicted RBP4.93□□□□□ -1.62
LINC00550-201ENST00000629293 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.93□□□□□ -1.62
LINC00550-201ENST00000629293 FBXL12Q9NXK8 326 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 IL37Q9NZH6 218 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 NDOR1Q9UHB4 597 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 AMACRQ9UHK6 382 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 FEZ2Q9UHY8 353 aaPredicted RBP4.93□□□□□ -1.62
LINC00550-201ENST00000629293 ADAMTS20P59510 1910 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 CENPEQ02224 2701 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 FAM170AA1A519 330 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 FAM92AA1XBS5 289 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 ZNF891A8MT65 544 aaPredicted RBP4.93□□□□□ -1.62
LINC00550-201ENST00000629293 MIF4GDA9UHW6 222 aaKnown RBP4.93□□□□□ -1.62
LINC00550-201ENST00000629293 HHLA1C9JL84 531 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 TTI1O43156 1089 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 TBL1XO60907 577 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 FGGP02679 453 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 EPXP11678 715 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 GZMAP12544 262 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 POLR2EP19388 210 aaKnown RBP4.93□□□□□ -1.62
LINC00550-201ENST00000629293 MXI1P50539 228 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 CCT8P50990 548 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 COPAP53621 1224 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 BCAT1P54687 386 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 GNGT1P63211 74 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 SLC20A2Q08357 652 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 ADIGQ0VDE8 80 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 ARHGAP44Q17R89 818 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 DUPD1Q68J44 220 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 NCEH1Q6PIU2 408 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 Q6ZNB5 142 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 TMC3Q7Z5M5 1100 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 MMAAQ8IVH4 418 aaKnown RBP4.93□□□□□ -1.62
LINC00550-201ENST00000629293 AHI1Q8N157 1196 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 GALNT15Q8N3T1 639 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 CARNMT1Q8N4J0 409 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 CADM4Q8NFZ8 388 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 OR2T3Q8NH03 318 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 UBASH3BQ8TF42 649 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 SEMA4DQ92854 862 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 KAT5Q92993 513 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 FAM149B1Q96BN6 582 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 LRRC45Q96CN5 670 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 RPL10LQ96L21 214 aaKnown RBP4.93□□□□□ -1.62
LINC00550-201ENST00000629293 CCDC74BQ96LY2 380 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 OMDQ99983 421 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 DNAI2Q9GZS0 605 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 CSNK1G1Q9HCP0 422 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 CD248Q9HCU0 757 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 CISHQ9NSE2 258 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 ZDHHC18Q9NUE0 388 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 WHRNQ9P202 907 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 USP36Q9P275 1121 aaKnown RBP4.93□□□□□ -1.62
LINC00550-201ENST00000629293 HESX1Q9UBX0 185 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 SYNJ2BP-COX16A0A087WUM0 186 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 GOLGA6L7A0A1B0GV03 622 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 AGRPO00253 132 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 PPFIA2O75334 1257 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 CLEC3AO75596 197 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 RGS9O75916 674 aaPredicted RBP4.93□□□□□ -1.62
LINC00550-201ENST00000629293 ZBED1O96006 694 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 PENKP01210 267 aaPredicted RBP4.93□□□□□ -1.62
LINC00550-201ENST00000629293 CYP1A2P05177 515 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 ATP5BP06576 529 aaKnown RBP4.93□□□□□ -1.62
LINC00550-201ENST00000629293 JMJD7P0C870 316 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 FLT3P36888 993 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 PEX5P50542 639 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms