RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 GRM3Q14832 879 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 PPP1R3AQ16821 1122 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 CERCAMQ5T4B2 595 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 ABRAXAS1Q6UWZ7 409 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 ALKAL1Q6UXT8 129 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 UTS2BQ765I0 119 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 SPPL2CQ8IUH8 684 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 OR9I1Q8NGQ6 314 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 TRPM4Q8TD43 1214 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 ZC3H15Q8WU90 426 aaKnown RBP13.09□□□□□ -0.31
CHD1L-210ENST00000622533 SNX19Q92543 992 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 C18orf25Q96B23 403 aaPredicted RBP13.09□□□□□ -0.31
CHD1L-210ENST00000622533 LRCH3Q96II8 777 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 KIFC1Q9BW19 673 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 TDRD1Q9BXT4 1180 aaKnown RBP13.09□□□□□ -0.31
CHD1L-210ENST00000622533 PDGFCQ9NRA1 345 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 ACOT9Q9Y305 439 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 TRAF6Q9Y4K3 522 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 SYNJ2BP-COX16A0A087WUM0 186 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 TRIM64A6NGJ6 449 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 NPR3P17342 541 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 LMO2P25791 158 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 ELK4P28324 431 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 TTKP33981 857 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 PIWIL4Q7Z3Z4 852 aaKnown RBP13.08□□□□□ -0.32
CHD1L-210ENST00000622533 LIMS2Q7Z4I7 341 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 TMEM151AQ8N4L1 468 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 B3GALNT2Q8NCR0 500 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 SGCDQ92629 289 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 MAELQ96JY0 434 aaKnown RBP13.08□□□□□ -0.32
CHD1L-210ENST00000622533 OLFM1Q99784 485 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 MRM3Q9HC36 420 aaKnown RBP13.08□□□□□ -0.32
CHD1L-210ENST00000622533 POLE4Q9NR33 117 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 COX16Q9P0S2 106 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 TRIM64BA6NI03 449 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 SDHDO14521 159 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 CXCL11O14625 94 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 EI24O14681 340 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 EEF1DP29692 281 aaKnown RBP13.08□□□□□ -0.32
CHD1L-210ENST00000622533 TPTEP56180 551 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 CCNA1P78396 465 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 IFITM3Q01628 133 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 ZNF33AQ06730 810 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 SEMA3BQ13214 749 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 CATSPER4Q7RTX7 472 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 MFSD2AQ8NA29 543 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 ABHD11Q8NFV4 315 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 OR13F1Q8NGS4 319 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 MROQ9BYG7 248 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 UPF3AQ9H1J1 476 aaKnown RBP13.08□□□□□ -0.32
CHD1L-210ENST00000622533 CHRAC1Q9NRG0 131 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 GTSE1Q9NYZ3 720 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 IFT80Q9P2H3 777 aaPredicted RBP13.08□□□□□ -0.32
CHD1L-210ENST00000622533 CD300AQ9UGN4 299 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 B3GNT3Q9Y2A9 372 aa13.08□□□□□ -0.32
CHD1L-210ENST00000622533 TMA7Q9Y2S6 64 aaKnown RBP13.08□□□□□ -0.32
CHD1L-210ENST00000622533 TANC1Q9C0D5 1861 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 IQCA1LA6NCM1 817 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 JRKO75564 520 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 HNRNPLP14866 589 aaKnown RBP eCLIP13.07□□□□□ -0.324e-10■■□□□ 14.2
CHD1L-210ENST00000622533 WARSP23381 471 aaKnown RBP13.07□□□□□ -0.32
CHD1L-210ENST00000622533 HOXA11P31270 313 aaPredicted RBP13.07□□□□□ -0.32
CHD1L-210ENST00000622533 DNAJB13P59910 316 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 TRAP1Q12931 704 aaKnown RBP13.07□□□□□ -0.32
CHD1L-210ENST00000622533 FASTKQ14296 549 aaKnown RBP13.07□□□□□ -0.32
CHD1L-210ENST00000622533 CLPPQ16740 277 aaPredicted RBP13.07□□□□□ -0.32
CHD1L-210ENST00000622533 TIGD2Q4W5G0 525 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 RPS27LQ71UM5 84 aaKnown RBP13.07□□□□□ -0.32
CHD1L-210ENST00000622533 CNTN4Q8IWV2 1026 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 FSTL5Q8N475 847 aaPredicted RBP13.07□□□□□ -0.32
CHD1L-210ENST00000622533 SHCBP1Q8NEM2 672 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 OR2T34Q8NGX1 318 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 OR2T3Q8NH03 318 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 KCTD4Q8WVF5 259 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 PPP1R2P1Q96PQ5 205 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 MLPHQ9BV36 600 aaPredicted RBP13.07□□□□□ -0.32
CHD1L-210ENST00000622533 TRIM8Q9BZR9 551 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 VTA1Q9NP79 307 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 PIGVQ9NUD9 493 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 KLQ9UEF7 1012 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 A0A087X1B8 175 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 TARM1B6A8C7 271 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 FAM47E-STBD1D6RA91 191 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 MRASO14807 208 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 GMNNO75496 209 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 SNAP29O95721 258 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 MT-ND1P03886 318 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 SLC35E2BP0CK96 405 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 YBX3P16989 372 aaKnown RBP eCLIP13.07□□□□□ -0.321e-6■□□□□ 11
CHD1L-210ENST00000622533 OXTRP30559 389 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 CD68P34810 354 aaPredicted RBP13.07□□□□□ -0.32
CHD1L-210ENST00000622533 GJA9P57773 515 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 RAB10P61026 200 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 SPCS2Q15005 226 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 GRIK4Q16099 956 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 INAVAQ3KP66 663 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 VASH1Q7L8A9 365 aaPredicted RBP13.07□□□□□ -0.32
CHD1L-210ENST00000622533 CMTR2Q8IYT2 770 aaKnown RBP13.07□□□□□ -0.32
CHD1L-210ENST00000622533 TOP6BLQ8N6T0 577 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 TERB1Q8NA31 727 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms