RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 OSBPL2Q9H1P3 480 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 NOCTQ9UK39 431 aaKnown RBP3.07□□□□□ -1.92
LPP-221ENST00000618621 PCDHGA4Q9Y5G9 962 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 KIF1BO60333 1816 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 MEI4A8MW99 385 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 RPL7AP62424 266 aaKnown RBP3.07□□□□□ -1.92
LPP-221ENST00000618621 CDK18Q07002 472 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 SLC25A52Q3SY17 297 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 CPTPQ5TA50 214 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 RETSATQ6NUM9 610 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 ARMC6Q6NXE6 501 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 CPNE8Q86YQ8 564 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 MINDY2Q8NBR6 621 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 CENPNQ96H22 339 aaPredicted RBP3.07□□□□□ -1.92
LPP-221ENST00000618621 CELF6Q96J87 481 aaKnown RBP3.07□□□□□ -1.92
LPP-221ENST00000618621 PANX3Q96QZ0 392 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 POMKQ9H5K3 350 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 NT5MQ9NPB1 228 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 SHANK1Q9Y566 2161 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 BCLAF3A2AJT9 711 aaKnown RBP3.07□□□□□ -1.92
LPP-221ENST00000618621 TISP43B9A030 160 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 MPZL2O60487 215 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 HNRNPLP14866 589 aaKnown RBP eCLIP3.07□□□□□ -1.921e-7■■■□□ 19.1
LPP-221ENST00000618621 ITGB6P18564 788 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 FEN1P39748 380 aaKnown RBP3.07□□□□□ -1.92
LPP-221ENST00000618621 CDKN2BP42772 138 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 SLC16A1P53985 500 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 FCGRTP55899 365 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 NRF1Q16656 503 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 KLHL12Q53G59 568 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 ZNF276Q8N554 614 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 POC5Q8NA72 575 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 WDR36Q8NI36 951 aaKnown RBP3.07□□□□□ -1.92
LPP-221ENST00000618621 MARCH2Q9P0N8 246 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 DUSP12Q9UNI6 340 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 AP4E1Q9UPM8 1137 aa3.07□□□□□ -1.92
LPP-221ENST00000618621 A0A087WZ62 844 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 WNT10BO00744 389 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 SEC22BO75396 215 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 ZMPSTE24O75844 475 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 CDH3P22223 829 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 DGKAP23743 735 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 PSMB4P28070 264 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 CD86P42081 329 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 CAPZA2P47755 286 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 CDH8P55286 799 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 USP46P62068 366 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 HERC3Q15034 1050 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 B3GALNT2Q8NCR0 500 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 ARRDC4Q8NCT1 418 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 HDAC10Q969S8 669 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 CDCA5Q96FF9 252 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 P2RX7Q99572 595 aaKnown RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 RHOJQ9H4E5 214 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 ALG9Q9H6U8 611 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 POLR1BQ9H9Y6 1135 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 TLR8Q9NR97 1041 aaKnown RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 UBAP1Q9NZ09 502 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 MAP2P11137 1827 aaKnown RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 OTCP00480 354 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 PENKP01210 267 aaPredicted RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 ARL3P36405 182 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 CENPAP49450 140 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 DLG1Q12959 904 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 TNFAIP8L3Q5GJ75 292 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 DCAF12L1Q5VU92 463 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 AMIGO2Q86SJ2 522 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 RAB43Q86YS6 212 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 AURKBQ96GD4 344 aaPredicted RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 CNGB3Q9NQW8 809 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 DNAAF2Q9NVR5 837 aaKnown RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 FBXO5Q9UKT4 447 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 SUV39H1O43463 412 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 PIGNO95427 931 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 C2P06681 752 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 LINC00032P0C843 101 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 SGCGQ13326 291 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 LSM12Q3MHD2 195 aaKnown RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 RUNDC3AQ59EK9 446 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 RNASEH2BQ5TBB1 312 aaKnown RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 SLC27A1Q6PCB7 646 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 CCDC81Q6ZN84 652 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 SVOPLQ8N434 492 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 PCDH20Q8N6Y1 951 aaKnown RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 CSPG4P5Q96PW8 444 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 SYT17Q9BSW7 474 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 MAGEE1Q9HCI5 957 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 TRPV5Q9NQA5 729 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 FBXW11Q9UKB1 542 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 NUDT5Q9UKK9 219 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 AP4B1Q9Y6B7 739 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 DOCK10Q96BY6 2186 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 TEX28O15482 410 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 MTTPP55157 894 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 ADIGQ0VDE8 80 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 ACAP2Q15057 778 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 OR52E8Q6IFG1 317 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 ERAP2Q6P179 960 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 CYP2R1Q6VVX0 501 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms