RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 BIRC2Q13490 618 aa2.83□□□□□ -1.96
TARDBP-220ENST00000618606 SLC1A5Q15758 541 aa2.83□□□□□ -1.96
TARDBP-220ENST00000618606 HSPB2Q16082 182 aa2.83□□□□□ -1.96
TARDBP-220ENST00000618606 EDRF1Q3B7T1 1238 aa2.83□□□□□ -1.96
TARDBP-220ENST00000618606 FAM83BQ5T0W9 1011 aa2.83□□□□□ -1.96
TARDBP-220ENST00000618606 TRNP1Q6NT89 227 aa2.83□□□□□ -1.96
TARDBP-220ENST00000618606 LCTLQ6UWM7 567 aa2.83□□□□□ -1.96
TARDBP-220ENST00000618606 TBC1D26Q86UD7 250 aa2.83□□□□□ -1.96
TARDBP-220ENST00000618606 KMT5CQ86Y97 462 aa2.83□□□□□ -1.96
TARDBP-220ENST00000618606 BBS10Q8TAM1 723 aa2.83□□□□□ -1.96
TARDBP-220ENST00000618606 SLC20A1Q8WUM9 679 aa2.83□□□□□ -1.96
TARDBP-220ENST00000618606 RND1Q92730 232 aa2.83□□□□□ -1.96
TARDBP-220ENST00000618606 SLC39A13Q96H72 371 aa2.83□□□□□ -1.96
TARDBP-220ENST00000618606 MPHOSPH6Q99547 160 aaKnown RBP2.83□□□□□ -1.96
TARDBP-220ENST00000618606 KXD1Q9BQD3 176 aa2.83□□□□□ -1.96
TARDBP-220ENST00000618606 LRRC1Q9BTT6 524 aa2.83□□□□□ -1.96
TARDBP-220ENST00000618606 CRB3Q9BUF7 120 aa2.83□□□□□ -1.96
TARDBP-220ENST00000618606 MOV10L1Q9BXT6 1211 aaKnown RBP2.83□□□□□ -1.96
TARDBP-220ENST00000618606 LMAN2LQ9H0V9 348 aa2.83□□□□□ -1.96
TARDBP-220ENST00000618606 SAYSD1Q9NPB0 183 aa2.83□□□□□ -1.96
TARDBP-220ENST00000618606 SMYD2Q9NRG4 433 aa2.83□□□□□ -1.96
TARDBP-220ENST00000618606 CISD1Q9NZ45 108 aaKnown RBP2.83□□□□□ -1.96
TARDBP-220ENST00000618606 TINAGQ9UJW2 476 aa2.83□□□□□ -1.96
TARDBP-220ENST00000618606 DERAQ9Y315 318 aa2.83□□□□□ -1.96
TARDBP-220ENST00000618606 SMCHD1A6NHR9 2005 aa2.82□□□□□ -1.96
TARDBP-220ENST00000618606 STX16-NPEPL1H3BU86 382 aa2.82□□□□□ -1.96
TARDBP-220ENST00000618606 STX16O14662 325 aa2.82□□□□□ -1.96
TARDBP-220ENST00000618606 PCNAP12004 261 aa2.82□□□□□ -1.96
TARDBP-220ENST00000618606 S1PR1P21453 382 aa2.82□□□□□ -1.96
TARDBP-220ENST00000618606 SEC61BP60468 96 aaKnown RBP2.82□□□□□ -1.96
TARDBP-220ENST00000618606 CTXN3Q4LDR2 81 aa2.82□□□□□ -1.96
TARDBP-220ENST00000618606 CCNYL2Q5T2Q4 361 aa2.82□□□□□ -1.96
TARDBP-220ENST00000618606 ZC2HC1BQ5TFG8 222 aa2.82□□□□□ -1.96
TARDBP-220ENST00000618606 CCSAPQ6IQ19 270 aaPredicted RBP2.82□□□□□ -1.96
TARDBP-220ENST00000618606 JMJD6Q6NYC1 403 aaPredicted RBP2.82□□□□□ -1.96
TARDBP-220ENST00000618606 C17orf99Q6UX52 265 aa2.82□□□□□ -1.96
TARDBP-220ENST00000618606 ZNF497Q6ZNH5 498 aa2.82□□□□□ -1.96
TARDBP-220ENST00000618606 MOB3CQ70IA8 216 aa2.82□□□□□ -1.96
TARDBP-220ENST00000618606 C1orf87Q8N0U7 546 aa2.82□□□□□ -1.96
TARDBP-220ENST00000618606 AGBL3Q8NEM8 1001 aa2.82□□□□□ -1.96
TARDBP-220ENST00000618606 KLHDC9Q8NEP7 349 aa2.82□□□□□ -1.96
TARDBP-220ENST00000618606 CADM4Q8NFZ8 388 aa2.82□□□□□ -1.96
TARDBP-220ENST00000618606 RAB40AQ8WXH6 277 aa2.82□□□□□ -1.96
TARDBP-220ENST00000618606 PPM1EQ8WY54 764 aa2.82□□□□□ -1.96
TARDBP-220ENST00000618606 THAP4Q8WY91 577 aa2.82□□□□□ -1.96
TARDBP-220ENST00000618606 ZNF524Q96C55 264 aa2.82□□□□□ -1.96
TARDBP-220ENST00000618606 HAUS8Q9BT25 410 aa2.82□□□□□ -1.96
TARDBP-220ENST00000618606 FKRPQ9H9S5 495 aa2.82□□□□□ -1.96
TARDBP-220ENST00000618606 CNGB3Q9NQW8 809 aa2.82□□□□□ -1.96
TARDBP-220ENST00000618606 GOLGA6L9A6NEM1 432 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 FAM90A7PA6NKC0 464 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 FAM90A22PA8MWA6 464 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 FAM90A12PA8MX19 464 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 FAM90A23PA8MXZ1 464 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 CEP104O60308 925 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 TK1P04183 234 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 ITGA2P17301 1181 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 ADD2P35612 726 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 USP8P40818 1118 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 TMPOP42166 694 aaKnown RBP2.81□□□□□ -1.96
TARDBP-220ENST00000618606 HTR3AP46098 478 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 CLDN2P57739 230 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 YWHAZP63104 245 aaKnown RBP2.81□□□□□ -1.96
TARDBP-220ENST00000618606 BLMHQ13867 455 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 RUNX2Q13950 521 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 KRT24Q2M2I5 525 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 SLC35E4Q6ICL7 350 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 ANKRD54Q6NXT1 300 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 ZNF852Q6ZMS4 543 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 MTSS1LQ765P7 747 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 SCCPDHQ8NBX0 429 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 CNOT9Q92600 299 aaKnown RBP2.81□□□□□ -1.96
TARDBP-220ENST00000618606 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.81□□□□□ -1.96
TARDBP-220ENST00000618606 PCGF6Q9BYE7 350 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 KCNN2Q9H2S1 579 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 FAM118AQ9NWS6 357 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 HCFC1R1Q9NWW0 138 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 GRHPRQ9UBQ7 328 aa2.81□□□□□ -1.96
TARDBP-220ENST00000618606 PABPN1LA6NDY0 278 aaKnown RBP2.8□□□□□ -1.96
TARDBP-220ENST00000618606 PLIN1O60240 522 aa2.8□□□□□ -1.96
TARDBP-220ENST00000618606 LDHAP00338 332 aaKnown RBP2.8□□□□□ -1.96
TARDBP-220ENST00000618606 IFIT2P09913 472 aaKnown RBP2.8□□□□□ -1.96
TARDBP-220ENST00000618606 PATE4P0C8F1 98 aa2.8□□□□□ -1.96
TARDBP-220ENST00000618606 SLC2A4P14672 509 aa2.8□□□□□ -1.96
TARDBP-220ENST00000618606 VEGFAP15692 232 aaPredicted RBP2.8□□□□□ -1.96
TARDBP-220ENST00000618606 RAD23BP54727 409 aa2.8□□□□□ -1.96
TARDBP-220ENST00000618606 ITGADQ13349 1161 aa2.8□□□□□ -1.96
TARDBP-220ENST00000618606 CTF1Q16619 201 aa2.8□□□□□ -1.96
TARDBP-220ENST00000618606 TIGD6Q17RP2 521 aa2.8□□□□□ -1.96
TARDBP-220ENST00000618606 ZNF876PQ49A33 203 aa2.8□□□□□ -1.96
TARDBP-220ENST00000618606 CCDC38Q502W7 563 aa2.8□□□□□ -1.96
TARDBP-220ENST00000618606 TMED8Q6PL24 325 aaPredicted RBP2.8□□□□□ -1.96
TARDBP-220ENST00000618606 SMC5Q8IY18 1101 aa2.8□□□□□ -1.96
TARDBP-220ENST00000618606 ZNF34Q8IZ26 560 aa2.8□□□□□ -1.96
TARDBP-220ENST00000618606 RNF113BQ8IZP6 322 aaKnown RBP2.8□□□□□ -1.96
TARDBP-220ENST00000618606 CNBD1Q8NA66 436 aa2.8□□□□□ -1.96
TARDBP-220ENST00000618606 ADAD2Q8NCV1 583 aaKnown RBP2.8□□□□□ -1.96
TARDBP-220ENST00000618606 OR10V1Q8NGI7 309 aa2.8□□□□□ -1.96
TARDBP-220ENST00000618606 EVI5LQ96CN4 794 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms