RNA–Protein interactions for RNA: ENST00000564969.5

FANCA-217, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 850 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-217ENST00000564969 ZNF30P17039 623 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 COL9A1P20849 921 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 NMBRP28336 390 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 SSTR1P30872 391 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 VIPR1P32241 457 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 STX2P32856 288 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 RPS9P46781 194 aaKnown RBP11.33□□□□□ -0.6
FANCA-217ENST00000564969 NEK3P51956 506 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 PTPN5P54829 565 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 FAM193AP78312 1265 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 ACVR1Q04771 509 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 SIGLEC14Q08ET2 396 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 ELP6Q0PNE2 266 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 CNTN1Q12860 1018 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 SEPT6Q14141 434 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 STAT4Q14765 748 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 CASP8Q14790 479 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 CRYMQ14894 314 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 UAP1Q16222 522 aaPredicted RBP11.33□□□□□ -0.6
FANCA-217ENST00000564969 CNGA3Q16281 694 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 ZDHHC20Q5W0Z9 365 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 CRTC1Q6UUV9 634 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 TMEM92Q6UXU6 159 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 DPPA4Q7L190 304 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 PARS2Q7L3T8 475 aaKnown RBP11.33□□□□□ -0.6
FANCA-217ENST00000564969 GLT6D1Q7Z4J2 308 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 IQCKQ8N0W5 287 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 CBARPQ8N350 705 aaPredicted RBP11.33□□□□□ -0.6
FANCA-217ENST00000564969 TTC30BQ8N4P2 665 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.33□□□□□ -0.6
FANCA-217ENST00000564969 EDAQ92838 391 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 ZNF669Q96BR6 464 aaPredicted RBP11.33□□□□□ -0.6
FANCA-217ENST00000564969 MFSD3Q96ES6 412 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 SIPA1Q96FS4 1042 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 FCRL3Q96P31 734 aaPredicted RBP11.33□□□□□ -0.6
FANCA-217ENST00000564969 CYTH2Q99418 400 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 IER2Q9BTL4 223 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 FOXQ1Q9C009 403 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 MKRN2Q9H000 416 aaKnown RBP11.33□□□□□ -0.6
FANCA-217ENST00000564969 EPB41L4BQ9H329 900 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 VIPAS39Q9H9C1 493 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 PCDH12Q9NPG4 1184 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 RAD18Q9NS91 495 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 TREX1Q9NSU2 369 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 NLE1Q9NVX2 485 aaPredicted RBP11.33□□□□□ -0.6
FANCA-217ENST00000564969 B4GALT6Q9UBX8 382 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 SIT1Q9Y3P8 196 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 PKP3Q9Y446 797 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 ZNF711Q9Y462 761 aa11.33□□□□□ -0.6
FANCA-217ENST00000564969 COL4A2P08572 1712 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 C1orf232A0A0U1RR37 186 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 TCRBV9S1A1TA0A576 114 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 AURKAO14965 403 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 MID1O15344 667 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 SLC7A4O43246 635 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 AP1G1O43747 822 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 CLDN7O95471 211 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 ADRB3P13945 408 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 HADHAP40939 763 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 MAGEA9P43362 315 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 EIF3BP55884 814 aaKnown RBP11.32□□□□□ -0.6
FANCA-217ENST00000564969 ARHGEF7Q14155 803 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 POM121L1PQ3SYA9 428 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 TTC31Q49AM3 519 aaPredicted RBP11.32□□□□□ -0.6
FANCA-217ENST00000564969 TMEM52BQ4KMG9 183 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 PDPK2PQ6A1A2 396 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 KIAA0930Q6ICG6 404 aaPredicted RBP11.32□□□□□ -0.6
FANCA-217ENST00000564969 ESRP1Q6NXG1 681 aaKnown RBP11.32□□□□□ -0.6
FANCA-217ENST00000564969 MAMSTRQ6ZN01 415 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 TRIM67Q6ZTA4 783 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 USP30Q70CQ3 517 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 LYSMD3Q7Z3D4 306 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 CROCCP2Q86T23 111 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 KBTBD6Q86V97 674 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.32□□□□□ -0.6
FANCA-217ENST00000564969 SPEM1Q8N4L4 309 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 HDDC3Q8N4P3 179 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 PJA1Q8NG27 643 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 GABPB2Q8TAK5 448 aaPredicted RBP11.32□□□□□ -0.6
FANCA-217ENST00000564969 CDKL2Q92772 493 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 FAM131CQ96AQ9 280 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 CDKN2AIPNLQ96HQ2 116 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 PKNOX2Q96KN3 472 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 ZNF778Q96MU6 729 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 SMIM14Q96QK8 99 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 OMDQ99983 421 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 ROPN1BQ9BZX4 212 aaPredicted RBP11.32□□□□□ -0.6
FANCA-217ENST00000564969 CHRDQ9H2X0 955 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 ACSS3Q9H6R3 686 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 PPCSQ9HAB8 311 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 ROPN1Q9HAT0 212 aaPredicted RBP11.32□□□□□ -0.6
FANCA-217ENST00000564969 PLAC1Q9HBJ0 212 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 IL17CQ9P0M4 197 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 RABGEF1Q9UJ41 708 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 NCKAP1Q9Y2A7 1128 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 KCTD3Q9Y597 815 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 ARL5AQ9Y689 179 aa11.32□□□□□ -0.6
FANCA-217ENST00000564969 NPIPB15A6NHN6 443 aaPredicted RBP11.31□□□□□ -0.6
FANCA-217ENST00000564969 H0Y858 1186 aa11.31□□□□□ -0.6
FANCA-217ENST00000564969 PSMD11O00231 422 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms