RNA–Protein interactions for RNA: ENST00000562523.1

NIP7-204, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 3

Gene NIP7, Length 760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-204ENST00000562523 GOLGA6BA6NDN3 693 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 DNAJC9-AS1A6NH13 148 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 LRRC3CA6NJW4 275 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.5□□□□□ -1.69
NIP7-204ENST00000562523 ALG1L2C9J202 215 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 SGK1O00141 431 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 TNFSF14O43557 240 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 DTNBO60941 627 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 TCEA3O75764 348 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 RNASEH2AO75792 299 aaKnown RBP4.5□□□□□ -1.69
NIP7-204ENST00000562523 LARGE1O95461 756 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 GASTP01350 101 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 GOLGA6DP0CG33 693 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 CSH1P0DML2 217 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 CSH2P0DML3 217 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 HOXB2P14652 356 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 TYMPP19971 482 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 LSP1P33241 339 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 CCT6AP40227 531 aaKnown RBP4.5□□□□□ -1.69
NIP7-204ENST00000562523 PDE6CP51160 858 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 UCNP55089 124 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 KDSRQ06136 332 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 SRSF1Q07955 248 aaKnown RBP eCLIP4.5□□□□□ -1.69
NIP7-204ENST00000562523 STRN3Q13033 797 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 LY6DQ14210 128 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 ZNF268Q14587 947 aaPredicted RBP4.5□□□□□ -1.69
NIP7-204ENST00000562523 BMP2KLQ5H9B9 411 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 EARS2Q5JPH6 523 aaKnown RBP4.5□□□□□ -1.69
NIP7-204ENST00000562523 ARHGAP40Q5TG30 622 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 METRNLQ641Q3 311 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 TXNDC8Q6A555 127 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 C16orf54Q6UWD8 224 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 KIAA1324Q6UXG2 1013 aaKnown RBP4.5□□□□□ -1.69
NIP7-204ENST00000562523 Q6ZNX1 250 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 TMPRSS12Q86WS5 348 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 KIF18BQ86Y91 864 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 THEM5Q8N1Q8 247 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 TMEM132CQ8N3T6 1108 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 FBXL16Q8N461 479 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 ZCCHC9Q8N567 271 aaKnown RBP4.5□□□□□ -1.69
NIP7-204ENST00000562523 CCDC89Q8N998 374 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 ANKRD42Q8N9B4 389 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 IL17RCQ8NAC3 791 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 SPPL2BQ8TCT7 592 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 PARD3BQ8TEW8 1205 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 SNX33Q8WV41 574 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 SNX19Q92543 992 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 RNF31Q96EP0 1072 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 BICD1Q96G01 975 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 ZBTB45Q96K62 511 aaPredicted RBP4.5□□□□□ -1.69
NIP7-204ENST00000562523 SENP8Q96LD8 212 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 PNKPQ96T60 521 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 TRIM4Q9C037 500 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 REXO4Q9GZR2 422 aaKnown RBP4.5□□□□□ -1.69
NIP7-204ENST00000562523 CDH19Q9H159 772 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 CAAP1Q9H8G2 361 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 RPF1Q9H9Y2 349 aaKnown RBP4.5□□□□□ -1.69
NIP7-204ENST00000562523 KMT5AQ9NQR1 393 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 AASDHPPTQ9NRN7 309 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 TBCCD1Q9NVR7 557 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 GOLGA6AQ9NYA3 693 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 CLIC5Q9NZA1 410 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 HSFX1Q9UBD0 423 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 UBQLN1Q9UMX0 589 aaKnown RBP4.5□□□□□ -1.69
NIP7-204ENST00000562523 PCDHGB3Q9Y5G1 929 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 TRPM6Q9BX84 2022 aa4.5□□□□□ -1.69
NIP7-204ENST00000562523 ATMQ13315 3056 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 STK36Q9NRP7 1315 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 IGHV1OR15-9A0A0B4J2B8 117 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 TBC1D3BA6NDS4 549 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 ANTXRLA6NF34 631 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 VSTM5A8MXK1 200 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 PRRT4C9JH25 899 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 K7EQS6 105 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 SLC9A3R1O14745 358 aaPredicted RBP4.49□□□□□ -1.69
NIP7-204ENST00000562523 PPEF2O14830 753 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 SLC16A4O15374 487 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 CBFA2T3O75081 653 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 GJB3O75712 270 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 KAT7O95251 611 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 ZNF883P0CG24 379 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 ADSSP30520 456 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 PTPN7P35236 360 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 GRK6P43250 576 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 NPTX2P47972 431 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 AARSP49588 968 aaKnown RBP eCLIP4.49□□□□□ -1.69
NIP7-204ENST00000562523 CCT8P50990 548 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 EVCP57679 992 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 CLRN1P58418 232 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 MRPS35P82673 323 aaKnown RBP4.49□□□□□ -1.69
NIP7-204ENST00000562523 SRSF4Q08170 494 aaKnown RBP4.49□□□□□ -1.69
NIP7-204ENST00000562523 SMARCB1Q12824 385 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 FOXF2Q12947 444 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 SMAD1Q15797 465 aaKnown RBP4.49□□□□□ -1.69
NIP7-204ENST00000562523 ZNF77Q15935 545 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 HLA-BQ31612 363 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 PRAMEF14Q5SWL7 426 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 L1TD1Q5T7N2 865 aaKnown RBP4.49□□□□□ -1.69
NIP7-204ENST00000562523 AGAP9Q5VTM2 703 aa4.49□□□□□ -1.69
NIP7-204ENST00000562523 SDHAF4Q5VUM1 108 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms