RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 WASF1Q92558 559 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 NPIPB3Q92617 1050 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 DNASE1L2Q92874 299 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 MIB2Q96AX9 1013 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 OTULINQ96BN8 352 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 FAM136AQ96C01 138 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 MSI2Q96DH6 328 aaKnown RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 STAMBPL1Q96FJ0 436 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 MARS2Q96GW9 593 aaKnown RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 CEP295NLQ96MC4 621 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 ZNF560Q96MR9 790 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 TTC25Q96NG3 672 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 SEPHS2Q99611 448 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 CCT7Q99832 543 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 POLR3CQ9BUI4 534 aaPredicted RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 ABHD14AQ9BUJ0 271 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 CACNG6Q9BXT2 260 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 TEX13AQ9BXU3 409 aaPredicted RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 HDHD5Q9BXW7 423 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 PUS3Q9BZE2 481 aaKnown RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 KATNBL1Q9H079 304 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.07□□□□□ -2.08
RTF1-207ENST00000561076 TMEM168Q9H0V1 697 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 NAPBQ9H115 298 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 PCED1AQ9H1Q7 454 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 KCNH6Q9H252 994 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 HSD3B7Q9H2F3 369 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 SMOC2Q9H3U7 446 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 CDCP1Q9H5V8 836 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 DENND2DQ9H6A0 471 aaPredicted RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 DNAJC18Q9H819 358 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 YY1AP1Q9H869 796 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 NOL11Q9H8H0 719 aaKnown RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 CNOT10Q9H9A5 744 aaKnown RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 LRRC40Q9H9A6 602 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 SLC28A3Q9HAS3 691 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 RNPEPL1Q9HAU8 725 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 SCPEP1Q9HB40 452 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 TUFT1Q9NNX1 390 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 PALMDQ9NP74 551 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 NGBQ9NPG2 151 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 PAK6Q9NQU5 681 aaPredicted RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 KLHL1Q9NR64 748 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 SETD4Q9NVD3 440 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 ARL8BQ9NVJ2 186 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 SIRT5Q9NXA8 310 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 ARL15Q9NXU5 204 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 ETAA1Q9NY74 926 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 GDE1Q9NZC3 331 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 SPG21Q9NZD8 308 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 CNIH4Q9P003 139 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 ANKFY1Q9P2R3 1169 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 MGAT4CQ9UBM8 478 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 SPASTQ9UBP0 616 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 HSPB7Q9UBY9 170 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 CNOT8Q9UFF9 292 aaKnown RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 EBF1Q9UH73 591 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 HACL1Q9UJ83 578 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 PTBP2Q9UKA9 531 aaKnown RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 PADI1Q9ULC6 663 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 PLAGL1Q9UM63 463 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 CARD8Q9Y2G2 431 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 ZDHHC9Q9Y397 364 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 C2CD2Q9Y426 696 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 NR2E1Q9Y466 385 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 JRKLQ9Y4A0 524 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 NOX1Q9Y5S8 564 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 SNX9Q9Y5X1 595 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 LIPGQ9Y5X9 500 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 HCFC2Q9Y5Z7 792 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 NFS1Q9Y697 457 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 SALL3Q9BXA9 1300 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 CYP3A7-CYP3A51PA0A087WV96 503 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 C15orf38-AP3S2A0A0A6YYH1 394 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 A0A0B4J293 547 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 MYADML2A6NDP7 307 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 FAM47DPA6NHR8 397 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 SDR42E2A6NKP2 422 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 MAGEB17A8MXT2 336 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 KDM4EB2RXH2 506 aaPredicted RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 H0Y8G0 127 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 CCDC188H7C350 402 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 AGPSO00116 658 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 DSCR3O14972 297 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 LDLRAD4O15165 306 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 MAGEB3O15480 346 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 SEC14L5O43304 696 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 DHHO43323 396 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 CA12O43570 354 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 TSPAN1O60635 241 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 PRAMEF11O60813 436 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 TRIM13O60858 407 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 PRSS23O95084 383 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 LUC7L3O95232 432 aaKnown RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 CELF2O95319 508 aaKnown RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 SIX3O95343 332 aaPredicted RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 C22orf31O95567 290 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 DIRAS3O95661 229 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 MT-CYBP00156 380 aaPredicted RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 AK1P00568 194 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms