RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 TUBGCP5Q96RT8 1024 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 DPH1Q9BZG8 443 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 PDFQ9HBH1 243 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 RAI2Q9Y5P3 530 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 CAPN8A6NHC0 703 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 ERVH48-1M5A8F1 160 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 DDX3XO00571 662 aaKnown RBP eCLIP13.67□□□□□ -0.22
SMAD3-214ENST00000560402 RASGRP1O95267 797 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 ATP1A1P05023 1023 aaKnown RBP13.67□□□□□ -0.22
SMAD3-214ENST00000560402 MYF5P13349 255 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 TIMP2P16035 220 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 MCM3P25205 808 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 HTR1BP28222 390 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 RBMS1P29558 406 aaKnown RBP13.67□□□□□ -0.22
SMAD3-214ENST00000560402 CXADRP78310 365 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 RHDQ02161 417 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 NFATC4Q14934 902 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 LRRC14Q15048 493 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 C3orf38Q5JPI3 329 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 LRRC73Q5JTD7 316 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 FAXCQ5TGI0 409 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 LVRNQ6Q4G3 990 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 MCOLN2Q8IZK6 566 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 ARL10Q8N8L6 244 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 SCG3Q8WXD2 468 aaKnown RBP13.67□□□□□ -0.22
SMAD3-214ENST00000560402 ANKRD7Q92527 254 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 TRIM11Q96F44 468 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 WRAP53Q9BUR4 548 aaKnown RBP13.67□□□□□ -0.22
SMAD3-214ENST00000560402 MAGEB5Q9BZ81 275 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 KLC2Q9H0B6 622 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 LRRC19Q9H756 370 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 CAAP1Q9H8G2 361 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 SNX12Q9UMY4 172 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 DOLKQ9UPQ8 538 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 SATB2Q9UPW6 733 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 ENTPD2Q9Y5L3 495 aa13.67□□□□□ -0.22
SMAD3-214ENST00000560402 CFAP69A5D8W1 941 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 ARHGAP42A6NI28 874 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 MUSKO15146 869 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 FANCGO15287 622 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 PRAMEF11O60813 436 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 GCATO75600 419 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 PIGNO95427 931 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 GZMAP12544 262 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 C6P13671 934 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 TSHRP16473 764 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 MMP12P39900 470 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 CSNK1DP48730 415 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 ZNF135P52742 658 aaPredicted RBP13.66□□□□□ -0.22
SMAD3-214ENST00000560402 HK3P52790 923 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 RPL7AP62424 266 aaKnown RBP13.66□□□□□ -0.22
SMAD3-214ENST00000560402 SKOR1P84550 965 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 MTM1Q13496 603 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 SPIDRQ14159 915 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 UGP2Q16851 508 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 PERM1Q5SV97 790 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 ACAD10Q6JQN1 1059 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 GKN2Q86XP6 184 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 OR6C4Q8NGE1 309 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 WBP1Q96G27 269 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 EXOC2Q96KP1 924 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 TCEAL2Q9H3H9 227 aaPredicted RBP13.66□□□□□ -0.22
SMAD3-214ENST00000560402 SUV39H2Q9H5I1 410 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 ATP13A3Q9H7F0 1226 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 MBNL1Q9NR56 388 aaKnown RBP13.66□□□□□ -0.22
SMAD3-214ENST00000560402 PADI4Q9UM07 663 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 TFR2Q9UP52 801 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 AP4E1Q9UPM8 1137 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 ATP8A1Q9Y2Q0 1164 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 CAPN6Q9Y6Q1 641 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 DUSP10Q9Y6W6 482 aa13.66□□□□□ -0.22
SMAD3-214ENST00000560402 CCDC187A0A096LP49 1063 aa13.65□□□□□ -0.22
SMAD3-214ENST00000560402 YY2O15391 372 aa13.65□□□□□ -0.22
SMAD3-214ENST00000560402 PALMO75781 387 aa13.65□□□□□ -0.22
SMAD3-214ENST00000560402 CTSEP14091 401 aa13.65□□□□□ -0.22
SMAD3-214ENST00000560402 SERPINA4P29622 427 aa13.65□□□□□ -0.22
SMAD3-214ENST00000560402 EIF3IQ13347 325 aaKnown RBP13.65□□□□□ -0.22
SMAD3-214ENST00000560402 C1orf61Q13536 156 aa13.65□□□□□ -0.22
SMAD3-214ENST00000560402 RFTN1Q14699 578 aaPredicted RBP13.65□□□□□ -0.22
SMAD3-214ENST00000560402 CYTH1Q15438 398 aa13.65□□□□□ -0.22
SMAD3-214ENST00000560402 KIF26BQ2KJY2 2108 aa13.65□□□□□ -0.22
SMAD3-214ENST00000560402 ERCC6LQ2NKX8 1250 aa13.65□□□□□ -0.22
SMAD3-214ENST00000560402 WSCD2Q2TBF2 565 aa13.65□□□□□ -0.22
SMAD3-214ENST00000560402 CLEC14AQ86T13 490 aa13.65□□□□□ -0.22
SMAD3-214ENST00000560402 PSTKQ8IV42 348 aaKnown RBP13.65□□□□□ -0.22
SMAD3-214ENST00000560402 ARL14Q8N4G2 192 aa13.65□□□□□ -0.22
SMAD3-214ENST00000560402 WDR36Q8NI36 951 aaKnown RBP13.65□□□□□ -0.22
SMAD3-214ENST00000560402 SNRNP27Q8WVK2 155 aaKnown RBP13.65□□□□□ -0.22
SMAD3-214ENST00000560402 ATXN7L3BQ96GX2 97 aa13.65□□□□□ -0.22
SMAD3-214ENST00000560402 LIN37Q96GY3 246 aaPredicted RBP13.65□□□□□ -0.22
SMAD3-214ENST00000560402 NAF1Q96HR8 494 aaKnown RBP13.65□□□□□ -0.22
SMAD3-214ENST00000560402 SLC46A1Q96NT5 459 aa13.65□□□□□ -0.22
SMAD3-214ENST00000560402 CCDC3Q9BQI4 270 aa13.65□□□□□ -0.22
SMAD3-214ENST00000560402 CLPBQ9H078 707 aa13.65□□□□□ -0.22
SMAD3-214ENST00000560402 PCDH12Q9NPG4 1184 aa13.65□□□□□ -0.22
SMAD3-214ENST00000560402 PARVAQ9NVD7 372 aa13.65□□□□□ -0.22
SMAD3-214ENST00000560402 KLQ9UEF7 1012 aa13.65□□□□□ -0.22
SMAD3-214ENST00000560402 PNMA8BQ9ULN7 279 aaPredicted RBP13.65□□□□□ -0.22
SMAD3-214ENST00000560402 NENFQ9UMX5 172 aa13.65□□□□□ -0.22
SMAD3-214ENST00000560402 HELZ2Q9BYK8 2649 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms