RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 NEDD9Q14511 834 aa4.17□□□□□ -1.74
VRK1-207ENST00000557352 CCNI2Q6ZMN8 369 aaPredicted RBP4.17□□□□□ -1.74
VRK1-207ENST00000557352 FAM160B2Q86V87 743 aa4.17□□□□□ -1.74
VRK1-207ENST00000557352 C2CD5Q86YS7 1000 aa4.17□□□□□ -1.74
VRK1-207ENST00000557352 ENAHQ8N8S7 591 aaPredicted RBP4.17□□□□□ -1.74
VRK1-207ENST00000557352 KCNH5Q8NCM2 988 aa4.17□□□□□ -1.74
VRK1-207ENST00000557352 OR13A1Q8NGR1 328 aa4.17□□□□□ -1.74
VRK1-207ENST00000557352 STAMQ92783 540 aa4.17□□□□□ -1.74
VRK1-207ENST00000557352 MXRA8Q9BRK3 442 aa4.17□□□□□ -1.74
VRK1-207ENST00000557352 TAOK3Q9H2K8 898 aa4.17□□□□□ -1.74
VRK1-207ENST00000557352 FBRSL1Q9HCM7 1045 aaKnown RBP4.17□□□□□ -1.74
VRK1-207ENST00000557352 ALKBH4Q9NXW9 302 aa4.17□□□□□ -1.74
VRK1-207ENST00000557352 EIF4G3O43432 1585 aaKnown RBP4.17□□□□□ -1.74
VRK1-207ENST00000557352 ERCC6Q03468 1493 aa4.17□□□□□ -1.74
VRK1-207ENST00000557352 TNIKQ9UKE5 1360 aa4.16□□□□□ -1.74
VRK1-207ENST00000557352 ADAMTS12P58397 1594 aa4.16□□□□□ -1.74
VRK1-207ENST00000557352 CCDC194A0A1B0GVG4 234 aa4.16□□□□□ -1.74
VRK1-207ENST00000557352 KRTAP9-6A8MVA2 160 aa4.16□□□□□ -1.74
VRK1-207ENST00000557352 SLC22A3O75751 556 aa4.16□□□□□ -1.74
VRK1-207ENST00000557352 CD58P19256 250 aa4.16□□□□□ -1.74
VRK1-207ENST00000557352 CCDC6Q16204 474 aa4.16□□□□□ -1.74
VRK1-207ENST00000557352 ANO1Q5XXA6 986 aa4.16□□□□□ -1.74
VRK1-207ENST00000557352 C19orf48Q6RUI8 117 aa4.16□□□□□ -1.74
VRK1-207ENST00000557352 SLC9B2Q86UD5 537 aa4.16□□□□□ -1.74
VRK1-207ENST00000557352 NOXA1Q86UR1 476 aa4.16□□□□□ -1.74
VRK1-207ENST00000557352 LSM14AQ8ND56 463 aaKnown RBP4.16□□□□□ -1.74
VRK1-207ENST00000557352 RND1Q92730 232 aa4.16□□□□□ -1.74
VRK1-207ENST00000557352 FBXO17Q96EF6 278 aa4.16□□□□□ -1.74
VRK1-207ENST00000557352 KXD1Q9BQD3 176 aa4.16□□□□□ -1.74
VRK1-207ENST00000557352 TRMT61BQ9BVS5 477 aaKnown RBP4.16□□□□□ -1.74
VRK1-207ENST00000557352 C17orf75Q9HAS0 396 aa4.16□□□□□ -1.74
VRK1-207ENST00000557352 ZNF334Q9HCZ1 680 aaPredicted RBP4.16□□□□□ -1.74
VRK1-207ENST00000557352 BABAM1Q9NWV8 329 aa4.16□□□□□ -1.74
VRK1-207ENST00000557352 GAPVD1Q14C86 1478 aa4.16□□□□□ -1.74
VRK1-207ENST00000557352 A0A1W2PS18 150 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 SERPINB2P05120 415 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 EDN2P20800 178 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 GRK6P43250 576 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 RELQ04864 619 aaPredicted RBP4.15□□□□□ -1.75
VRK1-207ENST00000557352 MMEL1Q495T6 779 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 PLA2G4FQ68DD2 849 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 HIST2H2BCQ6DN03 193 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 LRRC8EQ6NSJ5 796 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 ANKRD54Q6NXT1 300 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 SLC26A9Q7LBE3 791 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 DSG4Q86SJ6 1040 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 ODF3L1Q8IXM7 274 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 SCCPDHQ8NBX0 429 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 AGBL3Q8NEM8 1001 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 DUX3Q96PT4 197 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 EYA3Q99504 573 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 HAUS8Q9BT25 410 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 NUF2Q9BZD4 464 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 SCRT2Q9NQ03 307 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 DDX4Q9NQI0 724 aaKnown RBP4.15□□□□□ -1.75
VRK1-207ENST00000557352 CNGB3Q9NQW8 809 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 KLHL1Q9NR64 748 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 SNTG1Q9NSN8 517 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 PEMTQ9UBM1 199 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 TINAGQ9UJW2 476 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 TCF19Q9Y242 345 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 CARD8Q9Y2G2 431 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 RAPGEF2Q9Y4G8 1499 aa4.15□□□□□ -1.75
VRK1-207ENST00000557352 GRIN2BQ13224 1484 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 MAGI1Q96QZ7 1491 aaPredicted RBP4.14□□□□□ -1.75
VRK1-207ENST00000557352 RAD54L2Q9Y4B4 1467 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 TSPAN3O60637 253 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 ZG16O60844 167 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 AMBPP02760 352 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 CDH1P12830 882 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 HLA-DOBP13765 273 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 ETFAP13804 333 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 GM2AP17900 193 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 TIMP3P35625 211 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 CDKN1AP38936 164 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 PAPOLAP51003 745 aaKnown RBP4.14□□□□□ -1.75
VRK1-207ENST00000557352 ZNF667Q5HYK9 610 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 SERTAD4-AS1Q5TG53 156 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 KRBA2Q6ZNG9 492 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 MTSS1LQ765P7 747 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 ADGRG6Q86SQ4 1221 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 GPAT4Q86UL3 456 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 FOXRED2Q8IWF2 684 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 CHERPQ8IWX8 916 aaKnown RBP4.14□□□□□ -1.75
VRK1-207ENST00000557352 SIN3AQ96ST3 1273 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 PHF7Q9BWX1 381 aaPredicted RBP4.14□□□□□ -1.75
VRK1-207ENST00000557352 CSTL1Q9H114 145 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 ESRP2Q9H6T0 727 aaKnown RBP4.14□□□□□ -1.75
VRK1-207ENST00000557352 PCDH9Q9HC56 1237 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 ABCF3Q9NUQ8 709 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 CTNNAL1Q9UBT7 734 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 POU2F3Q9UKI9 436 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 EFCAB5A4FU69 1503 aa4.14□□□□□ -1.75
VRK1-207ENST00000557352 PDS5AQ29RF7 1337 aaKnown RBP4.14□□□□□ -1.75
VRK1-207ENST00000557352 ASPDHA6ND91 283 aa4.13□□□□□ -1.75
VRK1-207ENST00000557352 FAM72CH0Y354 149 aa4.13□□□□□ -1.75
VRK1-207ENST00000557352 IRAK2O43187 625 aa4.13□□□□□ -1.75
VRK1-207ENST00000557352 AGAP20933 346 aa4.13□□□□□ -1.75
VRK1-207ENST00000557352 IL15P40933 162 aaPredicted RBP4.13□□□□□ -1.75
VRK1-207ENST00000557352 ARL4CP56559 192 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms