RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 HACD3Q9P035 362 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 B4GALT6Q9UBX8 382 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 CYP8B1Q9UNU6 501 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 SHOC2Q9UQ13 582 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 SNX24Q9Y343 169 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 RALGAPA1Q6GYQ0 2036 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 TMEM131Q92545 1883 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 ZDBF2Q9HCK1 2354 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 PSMD11O00231 422 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 PRKCGP05129 697 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 SP9P0CG40 484 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 ZNF30P17039 623 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 LHCGRP22888 699 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 VIPR1P32241 457 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 MAGEA3P43357 314 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 ITGA8P53708 1063 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 SARNPP82979 210 aaKnown RBP13.12□□□□□ -0.31
DDX11-227ENST00000544652 CREB5Q02930 508 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 PTPRRQ15256 657 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 USP39Q53GS9 565 aaKnown RBP13.12□□□□□ -0.31
DDX11-227ENST00000544652 CRTC1Q6UUV9 634 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 CAND1Q86VP6 1230 aaKnown RBP13.12□□□□□ -0.31
DDX11-227ENST00000544652 PAF1Q8N7H5 531 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 ZBTB44Q8NCP5 570 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 OR2T34Q8NGX1 318 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 OR14C36Q8NHC7 312 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 GANCQ8TET4 914 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 RLN3Q8WXF3 142 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 ART4Q93070 314 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 TOE1Q96GM8 510 aaKnown RBP13.12□□□□□ -0.31
DDX11-227ENST00000544652 C19orf43Q9BQ61 176 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 FRMD8Q9BZ67 464 aaPredicted RBP13.12□□□□□ -0.31
DDX11-227ENST00000544652 TRIM31Q9BZY9 425 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 PCED1AQ9H1Q7 454 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 DPH5Q9H2P9 285 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 TRABDQ9H4I3 376 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 MBD1Q9UIS9 605 aaPredicted RBP13.12□□□□□ -0.31
DDX11-227ENST00000544652 GGT7Q9UJ14 662 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 ITM2BQ9Y287 266 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 SPO11Q9Y5K1 396 aa13.12□□□□□ -0.31
DDX11-227ENST00000544652 DLL1O00548 723 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 LILRB5O75023 590 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 SEMA4FO95754 770 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 CNR2P34972 360 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 NPY2RP49146 381 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 TERF1P54274 439 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 FAM193AP78312 1265 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 GUCY2DQ02846 1103 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 CAV1Q03135 178 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 CALCOCO2Q13137 446 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 AGERQ15109 404 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 TRADDQ15628 312 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 CNGA3Q16281 694 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 TMEM259Q4ZIN3 620 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 ARMC3Q5W041 872 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 KIAA1161Q6NSJ0 714 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 ZDHHC24Q6UX98 284 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 LIPIQ6XZB0 460 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 SLC36A4Q6YBV0 504 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 PPP1R21Q6ZMI0 780 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 TMC3Q7Z5M5 1100 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 TSPAN33Q86UF1 283 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 FAM124AQ86V42 546 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 TRIM69Q86WT6 500 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 FAM160A2Q8N612 972 aaPredicted RBP13.11□□□□□ -0.31
DDX11-227ENST00000544652 BRSK1Q8TDC3 778 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 GAB3Q8WWW8 586 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 EID2BQ96D98 161 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 SPACA7Q96KW9 195 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 SERPINB12Q96P63 405 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 RANBP9Q96S59 729 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 FAM129AQ9BZQ8 928 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 EPB41L5Q9HCM4 733 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 XAB2Q9HCS7 855 aaKnown RBP13.11□□□□□ -0.31
DDX11-227ENST00000544652 GDF3Q9NR23 364 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 FAM114A2Q9NRY5 505 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 ZSCAN32Q9NX65 697 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 ANAPC5Q9UJX4 755 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 ZNF711Q9Y462 761 aa13.11□□□□□ -0.31
DDX11-227ENST00000544652 ZFC3H1O60293 1989 aaKnown RBP13.11□□□□□ -0.31
DDX11-227ENST00000544652 LRRC72A6NJI9 287 aa13.1□□□□□ -0.31
DDX11-227ENST00000544652 LATO43561 262 aa13.1□□□□□ -0.31
DDX11-227ENST00000544652 PPFIA2O75334 1257 aa13.1□□□□□ -0.31
DDX11-227ENST00000544652 GM2AP17900 193 aa13.1□□□□□ -0.31
DDX11-227ENST00000544652 PSMA3P25788 255 aa13.1□□□□□ -0.31
DDX11-227ENST00000544652 HMGCLP35914 325 aa13.1□□□□□ -0.31
DDX11-227ENST00000544652 CCR5P51681 352 aa13.1□□□□□ -0.31
DDX11-227ENST00000544652 RPS21P63220 83 aaKnown RBP13.1□□□□□ -0.31
DDX11-227ENST00000544652 SEMG2Q02383 582 aa13.1□□□□□ -0.31
DDX11-227ENST00000544652 PTSQ03393 145 aa13.1□□□□□ -0.31
DDX11-227ENST00000544652 TAF1AQ15573 450 aaPredicted RBP13.1□□□□□ -0.31
DDX11-227ENST00000544652 LRRC66Q68CR7 880 aa13.1□□□□□ -0.31
DDX11-227ENST00000544652 LYSMD3Q7Z3D4 306 aa13.1□□□□□ -0.31
DDX11-227ENST00000544652 C11orf74Q86VG3 221 aa13.1□□□□□ -0.31
DDX11-227ENST00000544652 TTC30BQ8N4P2 665 aa13.1□□□□□ -0.31
DDX11-227ENST00000544652 DNAAF3Q8N9W5 541 aa13.1□□□□□ -0.31
DDX11-227ENST00000544652 CADM4Q8NFZ8 388 aa13.1□□□□□ -0.31
DDX11-227ENST00000544652 ASB12Q8WXK4 309 aa13.1□□□□□ -0.31
DDX11-227ENST00000544652 PRRX2Q99811 253 aa13.1□□□□□ -0.31
DDX11-227ENST00000544652 ZFYVE1Q9HBF4 777 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms