RNA–Protein interactions for RNA: ENST00000544360.5

HMBS-220, Transcript of hydroxymethylbilane synthase, humanhuman

TSL 3

Gene HMBS, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBS-220ENST00000544360 TTC31Q49AM3 519 aaPredicted RBP12.4□□□□□ -0.42
HMBS-220ENST00000544360 ALS2CLQ60I27 953 aa12.4□□□□□ -0.42
HMBS-220ENST00000544360 ESRP1Q6NXG1 681 aaKnown RBP12.4□□□□□ -0.42
HMBS-220ENST00000544360 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.4□□□□□ -0.42
HMBS-220ENST00000544360 Q6ZS52 159 aa12.4□□□□□ -0.42
HMBS-220ENST00000544360 ERN2Q76MJ5 926 aaKnown RBP12.4□□□□□ -0.42
HMBS-220ENST00000544360 PARS2Q7L3T8 475 aaKnown RBP12.4□□□□□ -0.42
HMBS-220ENST00000544360 LYSMD3Q7Z3D4 306 aa12.4□□□□□ -0.42
HMBS-220ENST00000544360 RASSF3Q86WH2 238 aa12.4□□□□□ -0.42
HMBS-220ENST00000544360 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.4□□□□□ -0.42
HMBS-220ENST00000544360 HDDC3Q8N4P3 179 aa12.4□□□□□ -0.42
HMBS-220ENST00000544360 OR4K2Q8NGD2 314 aa12.4□□□□□ -0.42
HMBS-220ENST00000544360 OR6P1Q8NGX9 317 aa12.4□□□□□ -0.42
HMBS-220ENST00000544360 GABPB2Q8TAK5 448 aaPredicted RBP12.4□□□□□ -0.42
HMBS-220ENST00000544360 FBF1Q8TES7 1133 aa12.4□□□□□ -0.42
HMBS-220ENST00000544360 STYXQ8WUJ0 223 aa12.4□□□□□ -0.42
HMBS-220ENST00000544360 MFSD3Q96ES6 412 aa12.4□□□□□ -0.42
HMBS-220ENST00000544360 SIPA1Q96FS4 1042 aa12.4□□□□□ -0.42
HMBS-220ENST00000544360 SCRN2Q96FV2 425 aa12.4□□□□□ -0.42
HMBS-220ENST00000544360 NECAB3Q96P71 396 aaPredicted RBP12.4□□□□□ -0.42
HMBS-220ENST00000544360 WDR83Q9BRX9 315 aaKnown RBP12.4□□□□□ -0.42
HMBS-220ENST00000544360 TRIM56Q9BRZ2 755 aaKnown RBP12.4□□□□□ -0.42
HMBS-220ENST00000544360 RSPH9Q9H1X1 276 aaPredicted RBP12.4□□□□□ -0.42
HMBS-220ENST00000544360 BPIFA1Q9NP55 256 aa12.4□□□□□ -0.42
HMBS-220ENST00000544360 PCDH12Q9NPG4 1184 aa12.4□□□□□ -0.42
HMBS-220ENST00000544360 BCCIPQ9P287 314 aaKnown RBP eCLIP12.4□□□□□ -0.42
HMBS-220ENST00000544360 B4GALT6Q9UBX8 382 aa12.4□□□□□ -0.42
HMBS-220ENST00000544360 MMP17Q9ULZ9 603 aa12.4□□□□□ -0.42
HMBS-220ENST00000544360 NCKAP1Q9Y2A7 1128 aa12.4□□□□□ -0.42
HMBS-220ENST00000544360 FNDC3AQ9Y2H6 1198 aaKnown RBP12.4□□□□□ -0.42
HMBS-220ENST00000544360 MTF2Q9Y483 593 aaPredicted RBP12.4□□□□□ -0.42
HMBS-220ENST00000544360 KCTD3Q9Y597 815 aa12.4□□□□□ -0.42
HMBS-220ENST00000544360 IKBKGQ9Y6K9 419 aa12.4□□□□□ -0.42
HMBS-220ENST00000544360 EXOC1LA0A1B0GW35 172 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 TLDC2A0PJX2 215 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 NPIPB15A6NHN6 443 aaPredicted RBP12.39□□□□□ -0.43
HMBS-220ENST00000544360 GOLGA6L10A6NI86 522 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 SMIM23A6NLE4 172 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 GOLGA8CPA6NN73 597 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 POC1B-GALNT4F8VUJ3 575 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 AURKAO14965 403 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 RNASEH2AO75792 299 aaKnown RBP12.39□□□□□ -0.43
HMBS-220ENST00000544360 ALDH1A2O94788 518 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 VAPBO95292 243 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 PAPSS2O95340 614 aaPredicted RBP12.39□□□□□ -0.43
HMBS-220ENST00000544360 CLDN7O95471 211 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 COL9A1P20849 921 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 SUOXP51687 545 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 ZXDAP98168 799 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 MGAT5Q09328 741 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 CNTN1Q12860 1018 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 STAT4Q14765 748 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 CNGA3Q16281 694 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 LONRF1Q17RB8 773 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 KLHL38Q2WGJ6 581 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 TJAP1Q5JTD0 557 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 STEAP4Q687X5 459 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 CRTC1Q6UUV9 634 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 TRIM67Q6ZTA4 783 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 TMEM135Q86UB9 458 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 GOLGA6L1Q8N7Z2 621 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 MDGA1Q8NFP4 955 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 ZBTB9Q96C00 473 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 DNAJC1Q96KC8 554 aaKnown RBP12.39□□□□□ -0.43
HMBS-220ENST00000544360 FCRL3Q96P31 734 aaPredicted RBP12.39□□□□□ -0.43
HMBS-220ENST00000544360 CYTH2Q99418 400 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 POLR3BQ9NW08 1133 aaPredicted RBP12.39□□□□□ -0.43
HMBS-220ENST00000544360 FBXL12Q9NXK8 326 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 TXNDC16Q9P2K2 825 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 SLC2A6Q9UGQ3 507 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 F5P12259 2224 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 KIAA1549LQ6ZVL6 1849 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 MIA3Q5JRA6 1907 aa12.39□□□□□ -0.43
HMBS-220ENST00000544360 A0A0U1RQS6 177 aa12.38□□□□□ -0.43
HMBS-220ENST00000544360 A0A1W2PP55 124 aa12.38□□□□□ -0.43
HMBS-220ENST00000544360 A0A1W2PQF6 199 aa12.38□□□□□ -0.43
HMBS-220ENST00000544360 TCRBV9S1A1TA0A576 114 aa12.38□□□□□ -0.43
HMBS-220ENST00000544360 MROH6A6NGR9 719 aa12.38□□□□□ -0.43
HMBS-220ENST00000544360 CCL22O00626 93 aa12.38□□□□□ -0.43
HMBS-220ENST00000544360 LDB2O43679 373 aa12.38□□□□□ -0.43
HMBS-220ENST00000544360 RPP40O75818 363 aaKnown RBP12.38□□□□□ -0.43
HMBS-220ENST00000544360 ERVK-10P10266 1014 aa12.38□□□□□ -0.43
HMBS-220ENST00000544360 ADRB3P13945 408 aa12.38□□□□□ -0.43
HMBS-220ENST00000544360 HADHAP40939 763 aa12.38□□□□□ -0.43
HMBS-220ENST00000544360 MSH2P43246 934 aa12.38□□□□□ -0.43
HMBS-220ENST00000544360 DGKEP52429 567 aa12.38□□□□□ -0.43
HMBS-220ENST00000544360 METAP1P53582 386 aa12.38□□□□□ -0.43
HMBS-220ENST00000544360 EIF3BP55884 814 aaKnown RBP12.38□□□□□ -0.43
HMBS-220ENST00000544360 MSLNQ13421 630 aaPredicted RBP12.38□□□□□ -0.43
HMBS-220ENST00000544360 PTPRCAPQ14761 206 aa12.38□□□□□ -0.43
HMBS-220ENST00000544360 CEP85LQ5SZL2 805 aa12.38□□□□□ -0.43
HMBS-220ENST00000544360 UBAP2Q5T6F2 1119 aaKnown RBP12.38□□□□□ -0.43
HMBS-220ENST00000544360 LRRC66Q68CR7 880 aa12.38□□□□□ -0.43
HMBS-220ENST00000544360 PDPK2PQ6A1A2 396 aa12.38□□□□□ -0.43
HMBS-220ENST00000544360 KIAA0930Q6ICG6 404 aaPredicted RBP12.38□□□□□ -0.43
HMBS-220ENST00000544360 LRIG3Q6UXM1 1119 aa12.38□□□□□ -0.43
HMBS-220ENST00000544360 DPPA4Q7L190 304 aa12.38□□□□□ -0.43
HMBS-220ENST00000544360 TSPAN33Q86UF1 283 aa12.38□□□□□ -0.43
HMBS-220ENST00000544360 KCNMB4Q86W47 210 aa12.38□□□□□ -0.43
HMBS-220ENST00000544360 TTC30BQ8N4P2 665 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms