RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 TXNRD3NBQ6F5E7 133 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 TRMT10BQ6PF06 316 aaKnown RBP17.59■□□□□ 0.41
PHRF1-205ENST00000533464 ZNF438Q7Z4V0 828 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 CCDC103Q8IW40 242 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 SLC35B2Q8TB61 432 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 PLEKHO2Q8TD55 490 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 PTCD2Q8WV60 388 aaKnown RBP17.59■□□□□ 0.41
PHRF1-205ENST00000533464 CXCL14O95715 111 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 TCF4P15884 667 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 FSTL1Q12841 308 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 SH3D19Q5HYK7 790 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 FSTL4Q6MZW2 842 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 RBM15BQ8NDT2 890 aaKnown RBP17.59■□□□□ 0.41
PHRF1-205ENST00000533464 SLC9A7Q96T83 725 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 SLC25A51Q9H1U9 297 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 RPS6KB2Q9UBS0 482 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 ABCC6O95255 1503 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 MATN3O15232 486 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 SEPT4O43236 478 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 PKMP14618 531 aaKnown RBP17.59■□□□□ 0.41
PHRF1-205ENST00000533464 TMED10P49755 219 aaKnown RBP17.59■□□□□ 0.41
PHRF1-205ENST00000533464 CHN2P52757 468 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 PPIDQ08752 370 aaKnown RBP17.59■□□□□ 0.41
PHRF1-205ENST00000533464 TIGD2Q4W5G0 525 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 ARL13AQ5H913 290 aaPredicted RBP17.59■□□□□ 0.41
PHRF1-205ENST00000533464 GPR158Q5T848 1215 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 ESRP1Q6NXG1 681 aaKnown RBP17.59■□□□□ 0.41
PHRF1-205ENST00000533464 CASP12Q6UXS9 341 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 CYP4X1Q8N118 509 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 MYO19Q96H55 970 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 EGFL7Q9UHF1 273 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 FBXO10Q9UK96 956 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 FBXW11Q9UKB1 542 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 TGDSO95455 350 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 FTH1P02794 183 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 MAPK10P53779 464 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 TYW3Q6IPR3 259 aaKnown RBP17.59■□□□□ 0.41
PHRF1-205ENST00000533464 ANKS1BQ7Z6G8 1248 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 PROX1Q92786 737 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.59■□□□□ 0.412e-6■■□□□ 12
PHRF1-205ENST00000533464 CFAP97Q9P2B7 532 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 PRKAG3Q9UGI9 489 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 RAI2Q9Y5P3 530 aa17.59■□□□□ 0.41
PHRF1-205ENST00000533464 PLIN3O60664 434 aa17.58■□□□□ 0.41
PHRF1-205ENST00000533464 HTR7P34969 479 aa17.58■□□□□ 0.41
PHRF1-205ENST00000533464 ZIK1Q3SY52 487 aaPredicted RBP17.58■□□□□ 0.41
PHRF1-205ENST00000533464 XKR6Q5GH73 641 aa17.58■□□□□ 0.41
PHRF1-205ENST00000533464 VWA5B1Q5TIE3 1220 aa17.58■□□□□ 0.41
PHRF1-205ENST00000533464 ATAD3AQ9NVI7 634 aa17.58■□□□□ 0.41
PHRF1-205ENST00000533464 NR2E3Q9Y5X4 410 aa17.58■□□□□ 0.41
PHRF1-205ENST00000533464 KCNU1A8MYU2 1149 aa17.58■□□□□ 0.41
PHRF1-205ENST00000533464 SVOPQ8N4V2 548 aa17.58■□□□□ 0.41
PHRF1-205ENST00000533464 EMID1Q96A84 441 aaPredicted RBP17.58■□□□□ 0.41
PHRF1-205ENST00000533464 ZFYVE1Q9HBF4 777 aa17.58■□□□□ 0.41
PHRF1-205ENST00000533464 KIAA1522Q9P206 1035 aaPredicted RBP17.58■□□□□ 0.41
PHRF1-205ENST00000533464 TCAF1Q9Y4C2 921 aa17.58■□□□□ 0.41
PHRF1-205ENST00000533464 SLC28A1O00337 649 aa17.58■□□□□ 0.4
PHRF1-205ENST00000533464 SGTAO43765 313 aa17.58■□□□□ 0.4
PHRF1-205ENST00000533464 NMBRP28336 390 aa17.58■□□□□ 0.4
PHRF1-205ENST00000533464 PDK3Q15120 406 aa17.58■□□□□ 0.4
PHRF1-205ENST00000533464 TRIP4Q15650 581 aaPredicted RBP17.58■□□□□ 0.4
PHRF1-205ENST00000533464 LACTB2Q53H82 288 aaPredicted RBP17.58■□□□□ 0.4
PHRF1-205ENST00000533464 RTKNQ9BST9 563 aa17.58■□□□□ 0.4
PHRF1-205ENST00000533464 OSBPL7Q9BZF2 842 aa17.58■□□□□ 0.4
PHRF1-205ENST00000533464 SSU72Q9NP77 194 aaKnown RBP17.58■□□□□ 0.4
PHRF1-205ENST00000533464 PCDH12Q9NPG4 1184 aa17.58■□□□□ 0.4
PHRF1-205ENST00000533464 RXRGP48443 463 aa17.58■□□□□ 0.4
PHRF1-205ENST00000533464 DPYSL2Q16555 572 aa17.58■□□□□ 0.4
PHRF1-205ENST00000533464 FUT10Q6P4F1 479 aa17.58■□□□□ 0.4
PHRF1-205ENST00000533464 LINGO4Q6UY18 593 aa17.58■□□□□ 0.4
PHRF1-205ENST00000533464 GPR156Q8NFN8 814 aa17.58■□□□□ 0.4
PHRF1-205ENST00000533464 CMASQ8NFW8 434 aaPredicted RBP17.58■□□□□ 0.4
PHRF1-205ENST00000533464 QRFPRQ96P65 431 aa17.58■□□□□ 0.4
PHRF1-205ENST00000533464 C1QTNF7Q9BXJ2 289 aa17.58■□□□□ 0.4
PHRF1-205ENST00000533464 NCKAP1Q9Y2A7 1128 aa17.58■□□□□ 0.4
PHRF1-205ENST00000533464 A8MUI8 341 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 NRP2O60462 931 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 METTL18O95568 372 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 PAX7P23759 505 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 POLD2P49005 469 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 NRLP54845 237 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 POU5F1Q01860 360 aaKnown RBP17.57■□□□□ 0.4
PHRF1-205ENST00000533464 TNK2Q07912 1038 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 VARS2Q5ST30 1063 aaKnown RBP17.57■□□□□ 0.4
PHRF1-205ENST00000533464 SPESP1Q6UW49 350 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 GPR180Q86V85 440 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 UPF1Q92900 1129 aaKnown RBP eCLIP17.57■□□□□ 0.4
PHRF1-205ENST00000533464 UBE2E3Q969T4 207 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 NACC2Q96BF6 587 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 QSOX1O00391 747 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 SERPINI2O75830 405 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.57■□□□□ 0.4
PHRF1-205ENST00000533464 ZNF549Q6P9A3 640 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 AAGABQ6PD74 315 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 CDK20Q8IZL9 346 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 C8orf59Q8N0T1 100 aaPredicted RBP17.57■□□□□ 0.4
PHRF1-205ENST00000533464 OR7D4Q8NG98 312 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 AZIN2Q96A70 460 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 MIEF2Q96C03 454 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 NDEL1Q9GZM8 345 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms