RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 CFDP1Q9UEE9 299 aaPredicted RBP6.03□□□□□ -1.44
PCF11-202ENST00000528336 MYO6Q9UM54 1294 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 RAI2Q9Y5P3 530 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 PREX2Q70Z35 1606 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 TSPOAP1O95153 1857 aa6.02□□□□□ -1.44
PCF11-202ENST00000528336 MYOM3Q5VTT5 1437 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 TEX13CA0A0J9YWL9 993 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 GAGE10A6NGK3 116 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 VWA5AO00534 786 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 TACC1O75410 805 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 CBSLP0DN79 551 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 NAGAP17050 411 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 GNLYP22749 145 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 ABCD3P28288 659 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 FMO4P31512 558 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 CBSP35520 551 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 MLH1P40692 756 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 PEX19P40855 299 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 HTR6P50406 440 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 FOXG1P55316 489 aaPredicted RBP6.02□□□□□ -1.45
PCF11-202ENST00000528336 SNX16P57768 344 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 BPIFB3P59826 476 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 DCAF7P61962 342 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 ABATP80404 500 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 PLIN5Q00G26 463 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 MEA1Q16626 185 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 PRAMEF19Q5SWL8 479 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 HECTD3Q5T447 861 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 TBC1D26Q86UD7 250 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 TMEM163Q8TC26 289 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 ATP6V1E2Q96A05 226 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 PLK2Q9NYY3 685 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 EPS15L1Q9UBC2 864 aa6.02□□□□□ -1.45
PCF11-202ENST00000528336 MIA2Q96PC5 1412 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 KIAA1107Q9UPP5 1409 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 KDM6BO15054 1643 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.01□□□□□ -1.45
PCF11-202ENST00000528336 CBY3A6NI87 242 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 EBAG9O00559 213 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 DKC1O60832 514 aaKnown RBP eCLIP6.01□□□□□ -1.45
PCF11-202ENST00000528336 TBX18O95935 607 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 COX7A2P14406 83 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 ZNF8P17098 575 aaPredicted RBP6.01□□□□□ -1.45
PCF11-202ENST00000528336 PTPN2P17706 415 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 SRD5A1P18405 259 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 POU1F1P28069 291 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 HOXD3P31249 432 aaPredicted RBP6.01□□□□□ -1.45
PCF11-202ENST00000528336 TDO2P48775 406 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 PCYT1AP49585 367 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 ZNF131P52739 623 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 NR1H2P55055 460 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 NAP1L1P55209 391 aaKnown RBP6.01□□□□□ -1.45
PCF11-202ENST00000528336 HDAC4P56524 1084 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 FAM27E3Q08E93 113 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 PSMD6Q15008 389 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 ARHGEF6Q15052 776 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 SLC9B1Q4ZJI4 515 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 RILPL1Q5EBL4 403 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 DNAJC21Q5F1R6 531 aaKnown RBP6.01□□□□□ -1.45
PCF11-202ENST00000528336 CCDC158Q5M9N0 1113 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 LRCH2Q5VUJ6 765 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 TRILQ7L0X0 811 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 RRM2BQ7LG56 351 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 LCA5Q86VQ0 697 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 MB21D2Q8IYB1 491 aaPredicted RBP6.01□□□□□ -1.45
PCF11-202ENST00000528336 ZUFSPQ96AP4 578 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 ZC3HAV1LQ96H79 300 aaKnown RBP6.01□□□□□ -1.45
PCF11-202ENST00000528336 SPAG5Q96R06 1193 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 DBNDD1Q9H9R9 158 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 PLSCR4Q9NRQ2 329 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 ARGLU1Q9NWB6 273 aaPredicted RBP6.01□□□□□ -1.45
PCF11-202ENST00000528336 PPP1R14DQ9NXH3 145 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 HSPB7Q9UBY9 170 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 NDRG3Q9UGV2 375 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 GPR34Q9UPC5 381 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 GPRASP1Q5JY77 1395 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 ADGRL1O94910 1474 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 PLEKHH2Q8IVE3 1493 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 CKAP5Q14008 2032 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 EVPLQ92817 2033 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 ITSN2Q9NZM3 1697 aa6.01□□□□□ -1.45
PCF11-202ENST00000528336 POGZQ7Z3K3 1410 aa6□□□□□ -1.45
PCF11-202ENST00000528336 SCAPERQ9BY12 1400 aa6□□□□□ -1.45
PCF11-202ENST00000528336 CDC42BPAQ5VT25 1732 aa6□□□□□ -1.45
PCF11-202ENST00000528336 CDC42BPBQ9Y5S2 1711 aa6□□□□□ -1.45
PCF11-202ENST00000528336 A0A087X0M5 115 aa6□□□□□ -1.45
PCF11-202ENST00000528336 A0A1B0GX30 115 aa6□□□□□ -1.45
PCF11-202ENST00000528336 KLRF2D3W0D1 207 aa6□□□□□ -1.45
PCF11-202ENST00000528336 ASAP2O43150 1006 aa6□□□□□ -1.45
PCF11-202ENST00000528336 RGS11O94810 467 aa6□□□□□ -1.45
PCF11-202ENST00000528336 ATP1A3P13637 1013 aa6□□□□□ -1.45
PCF11-202ENST00000528336 RYKP34925 604 aa6□□□□□ -1.45
PCF11-202ENST00000528336 CXCR3P49682 368 aa6□□□□□ -1.45
PCF11-202ENST00000528336 CLDN2P57739 230 aa6□□□□□ -1.45
PCF11-202ENST00000528336 FAM205BPQ63HN1 556 aa6□□□□□ -1.45
PCF11-202ENST00000528336 LRRC8EQ6NSJ5 796 aa6□□□□□ -1.45
PCF11-202ENST00000528336 ZNF449Q6P9G9 518 aa6□□□□□ -1.45
PCF11-202ENST00000528336 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6□□□□□ -1.45
PCF11-202ENST00000528336 PATL1Q86TB9 770 aaKnown RBP6□□□□□ -1.45
PCF11-202ENST00000528336 SAMD14Q8IZD0 417 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms