RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 AGBL3Q8NEM8 1001 aa3.94□□□□□ -1.78
CSDE1-210ENST00000525878 KLHDC9Q8NEP7 349 aa3.94□□□□□ -1.78
CSDE1-210ENST00000525878 BBS10Q8TAM1 723 aa3.94□□□□□ -1.78
CSDE1-210ENST00000525878 CNOT9Q92600 299 aaKnown RBP3.94□□□□□ -1.78
CSDE1-210ENST00000525878 RND1Q92730 232 aa3.94□□□□□ -1.78
CSDE1-210ENST00000525878 CDCA5Q96FF9 252 aa3.94□□□□□ -1.78
CSDE1-210ENST00000525878 KXD1Q9BQD3 176 aa3.94□□□□□ -1.78
CSDE1-210ENST00000525878 ESRP2Q9H6T0 727 aaKnown RBP3.94□□□□□ -1.78
CSDE1-210ENST00000525878 HCFC1R1Q9NWW0 138 aa3.94□□□□□ -1.78
CSDE1-210ENST00000525878 GDAQ9Y2T3 454 aa3.94□□□□□ -1.78
CSDE1-210ENST00000525878 TP53BP1Q12888 1972 aaPredicted RBP3.94□□□□□ -1.78
CSDE1-210ENST00000525878 TAF1P21675 1872 aa3.93□□□□□ -1.78
CSDE1-210ENST00000525878 AKR1B15C9JRZ8 316 aaPredicted RBP3.93□□□□□ -1.78
CSDE1-210ENST00000525878 CEP104O60308 925 aa3.93□□□□□ -1.78
CSDE1-210ENST00000525878 MTA2O94776 668 aa3.93□□□□□ -1.78
CSDE1-210ENST00000525878 BAG4O95429 457 aaKnown RBP3.93□□□□□ -1.78
CSDE1-210ENST00000525878 TUBBP07437 444 aa3.93□□□□□ -1.78
CSDE1-210ENST00000525878 PRSS1P07477 247 aa3.93□□□□□ -1.78
CSDE1-210ENST00000525878 PCNAP12004 261 aa3.93□□□□□ -1.78
CSDE1-210ENST00000525878 USP8P40818 1118 aa3.93□□□□□ -1.78
CSDE1-210ENST00000525878 HSD17B4P51659 736 aa3.93□□□□□ -1.78
CSDE1-210ENST00000525878 ACTR2P61160 394 aa3.93□□□□□ -1.78
CSDE1-210ENST00000525878 YWHAZP63104 245 aaKnown RBP3.93□□□□□ -1.78
CSDE1-210ENST00000525878 TUBB4BP68371 445 aa3.93□□□□□ -1.78
CSDE1-210ENST00000525878 MAP9Q49MG5 647 aa3.93□□□□□ -1.78
CSDE1-210ENST00000525878 TRNP1Q6NT89 227 aa3.93□□□□□ -1.78
CSDE1-210ENST00000525878 MTSS1LQ765P7 747 aa3.93□□□□□ -1.78
CSDE1-210ENST00000525878 ZNF524Q96C55 264 aa3.93□□□□□ -1.78
CSDE1-210ENST00000525878 MXRA8Q9BRK3 442 aa3.93□□□□□ -1.78
CSDE1-210ENST00000525878 LRRC1Q9BTT6 524 aa3.93□□□□□ -1.78
CSDE1-210ENST00000525878 EPHX3Q9H6B9 360 aa3.93□□□□□ -1.78
CSDE1-210ENST00000525878 DDX4Q9NQI0 724 aaKnown RBP3.93□□□□□ -1.78
CSDE1-210ENST00000525878 CNGB3Q9NQW8 809 aa3.93□□□□□ -1.78
CSDE1-210ENST00000525878 PER2O15055 1255 aa3.92□□□□□ -1.78
CSDE1-210ENST00000525878 EXTL3O43909 919 aa3.92□□□□□ -1.78
CSDE1-210ENST00000525878 ITGA2P17301 1181 aa3.92□□□□□ -1.78
CSDE1-210ENST00000525878 TMPOP42166 694 aaKnown RBP3.92□□□□□ -1.78
CSDE1-210ENST00000525878 ZC2HC1BQ5TFG8 222 aa3.92□□□□□ -1.78
CSDE1-210ENST00000525878 LCTLQ6UWM7 567 aa3.92□□□□□ -1.78
CSDE1-210ENST00000525878 TMEM57Q8N5G2 664 aa3.92□□□□□ -1.78
CSDE1-210ENST00000525878 SCCPDHQ8NBX0 429 aa3.92□□□□□ -1.78
CSDE1-210ENST00000525878 ANKRD9Q96BM1 317 aaPredicted RBP3.92□□□□□ -1.78
CSDE1-210ENST00000525878 KCNN2Q9H2S1 579 aa3.92□□□□□ -1.78
CSDE1-210ENST00000525878 SLC32A1Q9H598 525 aa3.92□□□□□ -1.78
CSDE1-210ENST00000525878 STN1Q9H668 368 aaKnown RBP3.92□□□□□ -1.78
CSDE1-210ENST00000525878 MKKSQ9NPJ1 570 aaPredicted RBP3.92□□□□□ -1.78
CSDE1-210ENST00000525878 RASSF1Q9NS23 344 aa3.92□□□□□ -1.78
CSDE1-210ENST00000525878 GOLGA6L9A6NEM1 432 aa3.91□□□□□ -1.78
CSDE1-210ENST00000525878 CLCNKAP51800 687 aa3.91□□□□□ -1.78
CSDE1-210ENST00000525878 KRT24Q2M2I5 525 aa3.91□□□□□ -1.78
CSDE1-210ENST00000525878 MMEL1Q495T6 779 aa3.91□□□□□ -1.78
CSDE1-210ENST00000525878 CCNYL2Q5T2Q4 361 aa3.91□□□□□ -1.78
CSDE1-210ENST00000525878 ZNF852Q6ZMS4 543 aa3.91□□□□□ -1.78
CSDE1-210ENST00000525878 ZNF497Q6ZNH5 498 aa3.91□□□□□ -1.78
CSDE1-210ENST00000525878 NOXA1Q86UR1 476 aa3.91□□□□□ -1.78
CSDE1-210ENST00000525878 DUSP19Q8WTR2 217 aa3.91□□□□□ -1.78
CSDE1-210ENST00000525878 RUBCNQ92622 972 aa3.91□□□□□ -1.78
CSDE1-210ENST00000525878 ZC3HAV1LQ96H79 300 aaKnown RBP3.91□□□□□ -1.78
CSDE1-210ENST00000525878 KIF17Q9P2E2 1029 aa3.91□□□□□ -1.78
CSDE1-210ENST00000525878 SUFUQ9UMX1 484 aa3.91□□□□□ -1.78
CSDE1-210ENST00000525878 STON1Q9Y6Q2 735 aa3.91□□□□□ -1.78
CSDE1-210ENST00000525878 SH2D7A6NKC9 451 aaPredicted RBP3.9□□□□□ -1.79
CSDE1-210ENST00000525878 B9A039 149 aa3.9□□□□□ -1.79
CSDE1-210ENST00000525878 PATE4P0C8F1 98 aa3.9□□□□□ -1.79
CSDE1-210ENST00000525878 SLC2A4P14672 509 aa3.9□□□□□ -1.79
CSDE1-210ENST00000525878 AGAP20933 346 aa3.9□□□□□ -1.79
CSDE1-210ENST00000525878 RAD23BP54727 409 aa3.9□□□□□ -1.79
CSDE1-210ENST00000525878 CHRNDQ07001 517 aa3.9□□□□□ -1.79
CSDE1-210ENST00000525878 ITGADQ13349 1161 aa3.9□□□□□ -1.79
CSDE1-210ENST00000525878 CTF1Q16619 201 aa3.9□□□□□ -1.79
CSDE1-210ENST00000525878 ZNF876PQ49A33 203 aa3.9□□□□□ -1.79
CSDE1-210ENST00000525878 TAOK1Q7L7X3 1001 aa3.9□□□□□ -1.79
CSDE1-210ENST00000525878 KIAA2013Q8IYS2 634 aa3.9□□□□□ -1.79
CSDE1-210ENST00000525878 ZNF34Q8IZ26 560 aa3.9□□□□□ -1.79
CSDE1-210ENST00000525878 CADM4Q8NFZ8 388 aa3.9□□□□□ -1.79
CSDE1-210ENST00000525878 AFG1LQ8WV93 481 aa3.9□□□□□ -1.79
CSDE1-210ENST00000525878 POF1BQ8WVV4 589 aa3.9□□□□□ -1.79
CSDE1-210ENST00000525878 ZNF583Q96ND8 569 aa3.9□□□□□ -1.79
CSDE1-210ENST00000525878 MOV10L1Q9BXT6 1211 aaKnown RBP3.9□□□□□ -1.79
CSDE1-210ENST00000525878 PLCB1Q9NQ66 1216 aa3.9□□□□□ -1.79
CSDE1-210ENST00000525878 PADI1Q9ULC6 663 aa3.9□□□□□ -1.79
CSDE1-210ENST00000525878 CARD8Q9Y2G2 431 aa3.9□□□□□ -1.79
CSDE1-210ENST00000525878 AMDHD2Q9Y303 409 aa3.9□□□□□ -1.79
CSDE1-210ENST00000525878 SMAD5-AS1Q9Y6J3 95 aa3.9□□□□□ -1.79
CSDE1-210ENST00000525878 ANP32CO43423 234 aa3.89□□□□□ -1.79
CSDE1-210ENST00000525878 MMP2P08253 660 aa3.89□□□□□ -1.79
CSDE1-210ENST00000525878 WEE2P0C1S8 567 aa3.89□□□□□ -1.79
CSDE1-210ENST00000525878 ETFAP13804 333 aa3.89□□□□□ -1.79
CSDE1-210ENST00000525878 EIF2S3P41091 472 aaKnown RBP3.89□□□□□ -1.79
CSDE1-210ENST00000525878 SGO1Q5FBB7 561 aa3.89□□□□□ -1.79
CSDE1-210ENST00000525878 STXBP5Q5T5C0 1151 aa3.89□□□□□ -1.79
CSDE1-210ENST00000525878 SLC35E4Q6ICL7 350 aa3.89□□□□□ -1.79
CSDE1-210ENST00000525878 FAM160B2Q86V87 743 aa3.89□□□□□ -1.79
CSDE1-210ENST00000525878 MYLK4Q86YV6 388 aaPredicted RBP3.89□□□□□ -1.79
CSDE1-210ENST00000525878 RNF113BQ8IZP6 322 aaKnown RBP3.89□□□□□ -1.79
CSDE1-210ENST00000525878 CNBD1Q8NA66 436 aa3.89□□□□□ -1.79
CSDE1-210ENST00000525878 OR10V1Q8NGI7 309 aa3.89□□□□□ -1.79
CSDE1-210ENST00000525878 SPPL3Q8TCT6 385 aa3.89□□□□□ -1.79
CSDE1-210ENST00000525878 RILPL2Q969X0 211 aa3.89□□□□□ -1.79
CSDE1-210ENST00000525878 FKRPQ9H9S5 495 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms