RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 DDX25Q9UHL0 483 aaKnown RBP3.22□□□□□ -1.89
CSDE1-208ENST00000524652 NRBP1Q9UHY1 535 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 FBXO2Q9UK22 296 aaPredicted RBP3.22□□□□□ -1.89
CSDE1-208ENST00000524652 CNPY2Q9Y2B0 182 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 HEMK1Q9Y5R4 338 aaPredicted RBP3.22□□□□□ -1.89
CSDE1-208ENST00000524652 MUC6Q6W4X9 2439 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 RALGAPA2Q2PPJ7 1873 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 NFASCO94856 1347 aa3.21□□□□□ -1.89
CSDE1-208ENST00000524652 ELP1O95163 1332 aa3.21□□□□□ -1.89
CSDE1-208ENST00000524652 IGSF9BQ9UPX0 1349 aa3.21□□□□□ -1.89
CSDE1-208ENST00000524652 A0A0G2JK05 382 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 TMEM272A0A1B0GTI8 110 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 VWA3AA6NCI4 1184 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 CLCA1A8K7I4 914 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 HAS3O00219 553 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 PRYO14603 147 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 PRPF4O43172 522 aaKnown RBP eCLIP3.21□□□□□ -1.95e-7■■■■□ 22.3
CSDE1-208ENST00000524652 THAP12O43422 761 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 CHMP2AO43633 222 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 ZC3H11AO75152 810 aaKnown RBP eCLIP3.21□□□□□ -1.9
CSDE1-208ENST00000524652 STAM2O75886 525 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 NDUFB8O95169 186 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 SGPL1O95470 568 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 GH1P01241 217 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 LGALS2P05162 132 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 ASGR1P07306 291 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 ZNF286BP0CG31 522 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 TGFB3P10600 412 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 GCFC2P16383 781 aaKnown RBP3.21□□□□□ -1.9
CSDE1-208ENST00000524652 CST5P28325 142 aaPredicted RBP3.21□□□□□ -1.9
CSDE1-208ENST00000524652 NDUFS1P28331 727 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 SLC5A2P31639 672 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 TCF7P36402 384 aaPredicted RBP3.21□□□□□ -1.9
CSDE1-208ENST00000524652 PBX1P40424 430 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 SOX2P48431 317 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 TRAPPC10P48553 1259 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 ACTR2P61160 394 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 PSMC6P62333 389 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 CYP4A11Q02928 519 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 GPS1Q13098 491 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 PPP2R5CQ13362 524 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 SEMA5AQ13591 1074 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 GBX1Q14549 363 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 SLC39A14Q15043 492 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 ARHGEF6Q15052 776 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 SAFBQ15424 915 aaKnown RBP eCLIP3.21□□□□□ -1.9
CSDE1-208ENST00000524652 INPP5JQ15735 1006 aaPredicted RBP3.21□□□□□ -1.9
CSDE1-208ENST00000524652 PKN2Q16513 984 aaKnown RBP3.21□□□□□ -1.9
CSDE1-208ENST00000524652 CALCRLQ16602 461 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 GLE1Q53GS7 698 aaKnown RBP3.21□□□□□ -1.9
CSDE1-208ENST00000524652 RILPL1Q5EBL4 403 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 NCAPH2Q6IBW4 605 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 PPP4R4Q6NUP7 873 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 XRRA1Q6P2D8 792 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 PDXDC1Q6P996 788 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 METTL7BQ6UX53 244 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 C18orf65Q6ZTR6 163 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 B4GALNT4Q76KP1 1039 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 TRAPPC11Q7Z392 1133 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 RFX6Q8HWS3 928 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 PPTC7Q8NI37 304 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 ABHD5Q8WTS1 349 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 U2AF1L4Q8WU68 220 aaKnown RBP3.21□□□□□ -1.9
CSDE1-208ENST00000524652 ZNF845Q96IR2 970 aaPredicted RBP3.21□□□□□ -1.9
CSDE1-208ENST00000524652 EPSTI1Q96J88 318 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 SPATA33Q96N06 139 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 ZPBPQ9BS86 351 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 TTLL2Q9BWV7 592 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 TEKT3Q9BXF9 490 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 GOLPH3LQ9H4A5 285 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 ZSCAN16Q9H4T2 348 aaPredicted RBP3.21□□□□□ -1.9
CSDE1-208ENST00000524652 TTC12Q9H892 705 aaPredicted RBP3.21□□□□□ -1.9
CSDE1-208ENST00000524652 ERVK-5Q9HDB9 667 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 PNPLA8Q9NP80 782 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 THSD1Q9NS62 852 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 TBC1D23Q9NUY8 699 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 RGL1Q9NZL6 768 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 CHMP5Q9NZZ3 219 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 SLC9A2Q9UBY0 812 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 RCOR1Q9UKL0 485 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 NOL7Q9UMY1 257 aaKnown RBP3.21□□□□□ -1.9
CSDE1-208ENST00000524652 PCDHA7Q9UN72 937 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 COG5Q9UP83 839 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 KIF3AQ9Y496 699 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 PTPN13Q12923 2485 aa3.21□□□□□ -1.9
CSDE1-208ENST00000524652 COL4A6Q14031 1691 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 EMSYQ7Z589 1322 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 GOLGA6CA6NDK9 693 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 GOLGA6BA6NDN3 693 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 C4orf47A7E2U8 309 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 CYSRT1A8MQ03 144 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 PRSS44E7EML9 344 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 E9PMD0 336 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 F8W8V4 182 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 DNM1LO00429 736 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 CCNT2O60583 730 aaKnown RBP3.2□□□□□ -1.9
CSDE1-208ENST00000524652 ATG13O75143 517 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 PPP6R2O75170 966 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 SLITRK3O94933 977 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 BAG4O95429 457 aaKnown RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms